zxs-un

zxs-un synced commits to main at zxs-un/illumos-port-wiki from mirror 2024-03-28 17:44:45 +08:00

zxs-un synced new reference main to zxs-un/illumos-port-wiki from mirror 2024-03-28 17:44:45 +08:00

zxs-un renamed repository from DFTbook to scnc/yyyu200.github.io-DFTbook

2023-11-20 17:53:27 +08:00

zxs-un synced commits to deepspeed-evo-attention at scnc/openfold from mirror 2023-11-09 10:33:32 +08:00

b7f35dce65 Use EvoformerFusedAttention directly to avoid all-zero bias term in column attention

5aa549583a Merge branch 'main' into deepspeed-evo-attention

099769d2ec Hotfix to correct seed type in inference

2338b896c7 Merge pull request #365 from aqlaboratory/dependabot/github_actions/actions/setup-python-4

dcd809d9c2 Bump actions/setup-python from 2 to 4

Compare 90 commits »

zxs-un synced commits to main at scnc/openfold from mirror 2023-11-09 10:33:32 +08:00

099769d2ec Hotfix to correct seed type in inference

2338b896c7 Merge pull request #365 from aqlaboratory/dependabot/github_actions/actions/setup-python-4

dcd809d9c2 Bump actions/setup-python from 2 to 4

51472e756a Merge pull request #366 from aqlaboratory/dependabot/github_actions/actions/checkout-4

13728b1203 Bump actions/checkout from 2 to 4

Compare 45 commits »

zxs-un synced commits to multimer at scnc/openfold from mirror 2023-11-09 10:33:32 +08:00

7e2b36e07f Fix for feature indexing when creating output protein object

c05b46749a Add description to dummy msa feats

d0f5531b0b Another fix for dummy msa feature creation

e67d041759 Fix for creating msa dummy features

f65b75fe48 Fix for loading old OF weights into refactored model

Compare 106 commits »

zxs-un synced commits to master at secc/ibex from mirror 2023-11-09 10:33:10 +08:00

bac72d96ec [ibex_pmp/lint] Declare functions before using them

zxs-un synced commits to jade/msi at secc/seL4 from mirror 2023-11-09 10:33:07 +08:00

05ebeef2d8 VT-d: add remappable MSI support

9818ca7aaf VT-d: add remappable IOAPIC support

8b61d70741 VT-d: add Interrupt Remapping Table support

6ff8f527af trivial: minor improvement

6eb97a3645 trivial: rename variables to match the spec

Compare 8 commits »

zxs-un synced commits to master at secc/seL4 from mirror 2023-11-09 10:33:07 +08:00

baacd4453a Add Pine64 Star64 support to CHANGES

49e5f47041 Update PLIC handling for Star64/U74-MC

e959f83962 Add support for Star64 SBC

4b8bed320d arm_global: document deadline assert

14ff0c28ec x86 setDeadline: must set at least 1 tick

Compare 36 commits »

zxs-un synced and deleted reference michaelm/refill_ready at secc/seL4 from mirror 2023-11-09 10:33:06 +08:00

zxs-un synced and deleted reference testing-more-mcs at secc/seL4 from mirror 2023-11-09 10:33:06 +08:00

zxs-un synced commits to dev at secc/NOVA-microhypervisor from mirror 2023-11-08 10:32:34 +08:00

8c9d17389d GEN: Updated interface specification.

ad4a9ecb6d ARM: Initialize interrupts and scheduling.

f19d90efde ARM: Unified PD,EC,SC,PT,SM,HIP,MBUF class.

52cb33b982 ARM: Added SMMU.

c8b5691776 ARM: Added HIP.

Compare 202 commits »

zxs-un synced commits to refs/tags/release-23.43.0 at secc/NOVA-microhypervisor from mirror 2023-11-08 10:32:34 +08:00

zxs-un synced new reference refs/tags/release-23.43.0 to secc/NOVA-microhypervisor from mirror 2023-11-08 10:32:34 +08:00

zxs-un synced and deleted reference fix-msastack-test-error at scnc/openfold from mirror 2023-10-14 10:33:17 +08:00

zxs-un synced commits to deepspeed-evo-attention at scnc/openfold from mirror 2023-10-14 10:33:17 +08:00

f545323c44 Added test for backward pass

a3de9cb930 Added kernel to template pair stack and updated tests

a098576109 Remove scale when using ds kernel

Compare 3 commits »

zxs-un synced commits to main at scnc/openfold from mirror 2023-10-14 10:33:17 +08:00

6381ddd6e9 README fixes for single sequence model

e8de822e9b Improved UX: Automatically set the single seq mode flag

c8c1239723 Separate out the seq mode configs from vanilla OF config

b45a91ba5c Limit the MSA distillation clusters to 1 in seq mode

3f592307eb Reduce redundancy in seq embedding config presets

Compare 39 commits »

zxs-un synced commits to multimer at scnc/openfold from mirror 2023-10-14 10:33:17 +08:00

377f854c4f Merge pull request #355 from dingquanyu/fix-non-permutation-codes

058fc74f91 fixed alignments when permutation is turned off

0ca661460d Merge pull request #353 from dingquanyu/permutation

a9d65037bc remove debug statements

61c7640c33 move ground truth preparation out of process_tensors_from_config

Compare 35 commits »

zxs-un synced commits to seqemb_model at scnc/openfold from mirror 2023-10-14 10:33:17 +08:00

e5a44aa2ef Improved UX: Automatically set the single seq mode flag

f14e599ff1 Separate out the seq mode configs from vanilla OF config

3162e91cc3 Limit the MSA distillation clusters to 1 in seq mode

f8d517bd00 Reduce redundancy in seq embedding config presets

55fd315569 Fix typos

Compare 6 commits »

zxs-un synced commits to setup-improvements at scnc/openfold from mirror 2023-10-14 10:33:17 +08:00

a3bb3c40c7 Add improved alignment-db creation script