mirror of https://gitlab.com/QEF/q-e.git
147 lines
5.8 KiB
Plaintext
147 lines
5.8 KiB
Plaintext
These are instructions on how to run the examples for some PostProc
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programs included in the Quantum ESPRESSO distribution.
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These examples try to exercise all the programs and features
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of the PP package.
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If you find that any relevant feature isn't being tested,
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please contact us (or even better, write and send us a new example).
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To run the examples, you should follow this procedure:
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1) Edit the "environment_variables" file from the main
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ESPRESSO directory, setting the following variables as needed:
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BIN_DIR = directory where ESPRESSO executables reside
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PSEUDO_DIR = directory where pseudopotential files reside
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TMP_DIR = directory to be used as temporary storage area
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If you have downloaded the full ESPRESSO distribution, you may set
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BIN_DIR=$TOPDIR/bin and PSEUDO_DIR=$TOPDIR/pseudo, where $TOPDIR is
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the root of the ESPRESSO source tree.
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TMP_DIR must be a directory you have read and write access to, with
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enough available space to host the temporary files produced by the
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example runs, and possibly offering high I/O performance (i.e.,
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don't use an NFS-mounted directory).
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2) If you want to test the parallel version of ESPRESSO, you will
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usually have to specify a driver program (such as "poe" or "mpirun")
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and the number of processors. This can be done by editing PARA_PREFIX
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and PARA_POSTFIX variables (in the "environment_variables" file).
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Parallel executables will be run by a command like this:
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$PARA_PREFIX pp.x $PARA_POSTFIX < file.in > file.out
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For example, if the command line is like this (as for an IBM SP):
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poe pp.x -procs 4 < file.in > file.out
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you should set PARA_PREFIX="poe", PARA_POSTFIX="-procs 4".
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See section "Running on parallel machines" of the user guide for details.
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Furthermore, if your machine does not support interactive use, you
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must run the commands specified below through the batch queueing
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system installed on that machine. Ask your system administrator
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for instructions.
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3) To run a single example, go to the corresponding directory (for
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instance, "example/example01") and execute:
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./run_example
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This will create a subdirectory "results", containing the input and
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output files generated by the calculation.
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Some examples take only a few seconds to run, while others may
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require several minutes depending on your system.
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4) In each example's directory, the "reference" subdirectory contains
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verified output files, that you can check your results against.
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The reference results were generated on a Linux PC with Intel compiler.
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On different architectures the precise numbers could be slightly
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different, in particular if different FFT dimensions are
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automatically selected. For this reason, a plain "diff" of your
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results against the reference data doesn't work, or at least, it
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requires human inspection of the results.
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-----------------------------------------------------------------------
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LIST AND CONTENT OF THE EXAMPLES
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example01:
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This example shows how to use pw.x and postprocessing codes to
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make a contour plot in the [110] plane of the charge density for
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Si, and to plot the band structure of Si.
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example02:
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This example shows how to use pw.x to calculate the DOS of Ni
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and how to plot the Fermi Surface using XCrysDen
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example03:
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This example shows a calculation of STM maps.
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example04:
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This example shows how to use bands.x to check the band symmetry
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of fcc-Pt with a fully relativistic pseudo-potential including
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spin-orbit coupling, and to compute the projected DOS.
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example05:
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This example shows how to use pmw.x to generate better projectors for
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LDA+U calculation on FeO. Read file README for more details
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example06:
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This example calculates the band structure of ferromagnetic bcc-Fe
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in the noncollinear spin-orbit case.
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projected_bands_example:
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This example shows how to produce projected ("fat") band plots
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dipole_example:
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This example will calculate the water dipole and calculate the work
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function on a Ni slab with a CO molecule adsorbed using the dipole
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correction.
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CLS_IS_example, CLS_FS_example
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These examples show how to calculate initial-state (IS) and final-state (FS)
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core-level-shift (CLS) using the core-excited pseudo-potential technique.
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WorkFct_example:
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This example shows how to use pw.x, pp.x, and average.x to
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compute the work function of a metal using the slab-supercell
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approximation. This example is of a 4 layer unrelaxed Al(100) slab
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with 5 equivalent layers of vacuum between the surfaces.
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WAN90_example:
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This example shows how to use pw2wannier90.x in conjunction with
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Wannier90 (http://www.wannier.org) to obtain maximally-localised
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Wannier functions (MLWFs) for the valence bands of diamond.
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WannierHam_example:
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This example shows how to generate a model Hamiltonian in a
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Wannier functions basis, using pw.x and wannier_ham.x.
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MolDos_example:
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This example calculates the projection of the density of states of
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a system, containing a molecule, on the molecular orbitals of the
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molecule (separately computed).
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ForceTheorem_example:
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This example shows how to compute the magnetic anisotropy energy (MAE)
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with the "Force Theorem" method (Phys. Rev. B 90, 205409 (2014), and to
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get its local decomposition over atomic orbitals using projwfc.x.
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fermisurf_example:
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This example generate input files for FermiSurfer
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(http://osdn.jp/projects/fermisurfer/) to display Fermi surfaces with
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color plots of the magnitude of the Fermi velocity and orbital characters.
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BGW_example:
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This example generates output files for BerkeleyGW using the pw2bgw.x
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utility
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ACF_example:
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This example tests the ppacf.x utility
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Y. Jiao, E. Schr\"oder, and P. Hyldgaard, Phys. Rev. B 97, 085115 (2018);
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Y. Jiao, E. Schr\"oder, P. Hyldgaard, J. Chem. Phys. 148, 194115 (2018).
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