add atom viewer

docs/source/usage/project/atoms_viewer.rst

@@ -1,105 +1,90 @@
 Atoms Viewer
 ============
 
-BURAI platform can replace, delete, move, and add the atom.
-This chapter explain these operations.
+Project tab has the atoms viewer, which can edit atoms in the model.
+It has the following operations.
 
-Replace Atom
+Rename Atom
 ------------
-In case users replace the atom to other element,
-The first step is selecting the atom which users want to replace.
-Then, the menu appears with right click. users select “Rename selected atoms”
+You can rename an atom to another atom.
+The first step is selecting the atom with right click.
+Then, you select “Rename selected atoms” from menu.
 
 .. image:: ../../../img/projects/imgCreateJob_ReplaceAtom01.png
    :scale: 30 %
-   :align: center
-
-The periodic table appears, and users select element that users want to replace.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_ReplaceAtom02.png
    :scale: 30 %
-   :align: center
-
-users can replace the atom.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_ReplaceAtom03.png
    :scale: 30 %
-   :align: center
-
+   :align: left
 
+| 
 
 Delete Atom
 -----------
-We introduce the operation of delete the atom.
-The first step is selecting the atom which users want to delete.
-Then, the menu appears. users select “Delete selected atoms”
+You can delete an atom.
+The first step is selecting the atom with right click.
+Then, you select “Delete selected atoms” from menu.
 
 .. image:: ../../../img/projects/imgCreateJob_DeleteAtom00.png
    :scale: 30 %
-   :align: center
-
-The confirmation screen appears.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_DeleteAtom01.png
    :scale: 30 %
-   :align: center
-
-users select “OK”, and users can delete the atom.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_DeleteAtom02.png
    :scale: 30 %
-   :align: center
+   :align: left
 
+| 
 
 Move Atom
 ---------
-We explain the operation that users move the selected atom in the model.
-The first step is selecting the atom that users want to move.
-Then, the menu appears with right click. Users select “Move selected atoms”
-
+You can move an atom.
+The first step is selecting the atom with right click.
+Then, you select “Move selected atoms” from menu.
 
 .. image:: ../../../img/projects/imgCreateJob_MoveAtom00.png
    :scale: 30 %
-   :align: center
-
-The green plane surface appears on the model. The plane surface means the area that the selected atom can move.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_MoveAtom01.png
    :scale: 30 %
-   :align: center
-
-Users decide the area, and users move the atom.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_MoveAtom02.png
    :scale: 30 %
-   :align: center
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_MoveAtom03.png
    :scale: 30 %
-   :align: center
+   :align: left
+   
+|
 
-
-Add Atom
+Put Atom
 --------
-We introduce the operation of put the atom.
-The first step is clicking the area which users want to put the atom, then menu window appears with right click.
-Users select “Put an atom”
+You can put an atom.
+The first step is selecting the atom with right click.
+Then, you select Put an atom” from menu.
 
 .. image:: ../../../img/projects/imgCreateJob_PutAtom00.png
    :scale: 30 %
-   :align: center
-
-The periodic table appears, and users select element which users want to add in the area.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_PutAtom01.png
    :scale: 30 %
-   :align: center
-
-After users select the element, users can put the atom.
+   :align: left
 
 .. image:: ../../../img/projects/imgCreateJob_PutAtom02.png
    :scale: 30 %
-   :align: center
+   :align: left
 
 
 

docs/source/usage/project/create.rst

@@ -1,9 +1,8 @@
 Creating Project
 ================
 
-Users select the calculation type in following menu to create a Quantum ESPRESSO project.
+Clicking the 3D model in the explorer open a new tab.
+The tab contains a QE project.
 
+add zu
 
-.. image:: ../../../img/input_editor/imgCreateJob_menu.png
-   :scale: 40 %
-   :align: center

docs/source/usage/web_browser.rst

@@ -8,13 +8,14 @@ if you want to search something at the internet, you should select "Web" from me
    :scale: 30 %
    :align: left
 
+| 
 Getting Crystal Structures
 --------------------------
 
 This chapter illustrate to get the crystal structure from some web site.
 You search the crystal data from *build-in* web browser.
 Opening the link of the crystal structure pops up the window with 3D model.
-Clicking the model shows the new project tub.
+Clicking the model shows the new project tab.
 
 .. image:: ../../img/imgWeb_searchNaCl00.png
    :scale: 30 %
@@ -28,6 +29,7 @@ Clicking the model shows the new project tub.
    :scale: 30 %
    :align: left
 
+| 
 Getting Pseudopotentials
 ------------------------