quantum-espresso/TODO

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TODO LIST - December 2007
TO BE DONE BEFORE THE 4.0 VERSION (to be released hopefully soon)
- License: update copyright notice in the header of all files
- Web: move download and PP page from pwscf.org to quantum-espresso.org;
move Tutorial and Examples from wiki into Learn page;
find a way to extract the User Guide and other info from wiki
into a printable format (pdf or html);
advertise the forthcoming release
- Doc: write reference paper for q-e
- Doc: move the contents of the various README and most of the contents
of the Doc/ directory from CVS into wiki
- Doc: add benchmarks suite and results
- Code: PAW, including PAWsets (Lorenzo-SdG)
- Code: GIPAW (Paris-Davide)
- Code: electron-phonon (Paris 2)?
- Code: other "external" contributions to Q-E: Wannier, Want, SAX, ...
- Contrib: QHA + projected phonon DOS codes (Eyvaz)
- Contrib: band plotting (Jonathan)
- Bug: xcrysden doesn't read any longer some output files
- Bug: more problems in electric fields/Berry phase noticed by David V.
- UPF: update UPF format to allow hack-free inclusion of spin-orbit/GIPAW/PAW
- Bin: should we make a few binary distributions?
- Mac OS-X 10.4 Intel
- Linux Intel 32bit serial
- Linux Intel/AMD 64bit serial
Postponed:
- Code: corrections for charged/isolated systems (Ismaila-Nicola)
- Contrib: metaGGA atomic code (Yosuke-needs work)
- Contrib: math parser (Javier-license problem)
CVS/INSTALLATION/PORTING
- restructuring of the CVS repository, dividing it into "base libs",
"base QE", additional packages - release.sh is clumsy, simplify
- remove obsolete stuff from install/
- put misc scripts into a Utils/ subdirectory
COMMON
- use qexml for xml file processing so that a single, easily
exportable routine, is used everywhere. Requires some though
on how to deal with parallelism without filling qexml with
parallel stuff
- pseudopotentials: support new format (xml) if/when ready
add default cutoff values as well as radii of augmented charge
in pseudopotential files
- adding/removing/modifying input variables is too complex
Why are some checks on input variables performed in read_namelist,
while others apparently similar are in */input.f90?
- time steps in ps/fs (both in input and in output)
- merge spherical harmonics between CP-PW and FPMD
merge integration routines, random number generators
- spherical bessel functions: only one function calculating dj_l/dx
j_l with l=-1 should not be needed
- too many confusing error messages are still around
- replace calls to level-1 blas copy, scal, axpy, with f90 syntax
- CP "small boxes" vs PW "real-space" approach. Why is the real-space
approach not working well with rrkjus PP?
- It would be nice to merge "cell_base_init" from CPV to PW,
and also "cellmd" module of PW into "cell_base" of CPV
- there should be a single function or routine for periodic boundary
conditions (i.e. bringing all atoms inside the unit cell)
PW
- inversion symmetry should allow real hamiltonian and wavefunctions (Dario)
- nscf calculations are slow. There must be a way to make a better usage
of the available information from the scf calculation: wavefunctions
are just discarded. Same for phonon calculation: it shouldn't be needed
to recalculate everything almost from scratch at each different q-points
- atomic coordinates should be read from file and only optionally
from input in non-scf calculations: the present method is error-prone
- Fermi-Dirac: pass T instead of "broadening", make it possible
to use it on top of smearing for free-energy calculations
- add possibility to read atomic positions from file
- Use more standard choices for crystal axis (if any)
- make hpsi/spsi/newd/addusdens/CG/DIIS faster
- remove complex factor i**l from beta fct and q(r) (preliminary)
- shift structure factor from beta to psi when computing becp (reduce memory)
- use real BLAS routine instead of COMPLEX one in hpsi/spsi
(at least 2 times faster).
- use only half of the G's when computing real integrals (2 times faster)
- seek for CG and DIIS algoritms that only use (H-eS)|psi> and not
the two vector separately ... compute it in one single call. (this way
S|psi> is inexpensive)
- output should be more informative and less confused
- write explicitly and unambiguosly the units of output quantities
and also what are exactly the output quantites!
- some symmetry-related routines such as sgama are too complex
Verify that a group is a group (call multable again in sgama)
- add traceback in error (error_handler module)
POSTPROCESSING
- complete postprocessing in Gamma case (only average missing),
and with CP/FPMD data
- stm_wfc_matching not working
- Move to a xml-based format for the dynamical matrix files
- pwtools: add example of a plot of phonon dispersions
Fix fqha.f90
PH, D3, Gamma
- Phonon restart is unreliable. In addition to making it more reliable,
we need to make the calculation of each mode independent and the
respective results independently restorable, so that execution on the
grid is straightforward and at least partial restart safe in all cases
- replace static npertx with dynamical npert
- C(R) might be calculated at the end of a dispersion run
- any possibility to merge the various solve_* ?
- use charge mixing instead of potential mixing
- move all phonon-specific stuff (symmetry etc) from pw into phonon
- clean up the logic of symmetry: there shouldn't be any longer the
present confusion on whose symmetries we are dealing with. We should
either keep unchanged the crystal symmetries and use indices to
locate symmetries of the small group of q, or keep different copies
for the symmetries of the crystal and of the small group of q
- same input for Gamma and PH
- replace "use pwcom" into more "use" statements
- stop with 'prefix.EXIT' and restart (PH now has it; D3 & Gamma do not
have any infrastructure for stopping like this)
- the calculation of P_c x|\psi> should be cleanup up and extracted
from phonon, since it may be used for other calculations as well
(TDDFT, photoemission cross sections, etc)
- spin-polarized BLYP not implemented
DOCUMENTATION
- complete move to wiki-based documentation
- single source (xml?) for text file, GUI help file, user guide
CP/FPMD:
- Proposals from Princeton:
* default set up for molecular calculations
* default choice for spin restricted and spin unrestricted configurations
for neutral systems (maybe already there?)
* default values for emass(emass=300), for dt (dt=7), for preconditioning
cutoff (3)
* the code should consider a common error:
dt^2/emass too large does not allow ortho to converge
or cause energy to increase as time step evolve
* automatic box grid for USPP from radii of augmented charge
* Electronic minimization: SD should be discouraged: use damp as default,
introduce an automatic default schedule, something as:
1st step sd followed by 5 steps with with damp= 0.8,
followed by 5 steps with damp=0.5,
followed by 10 steps with damp=0.3,
followed by 10 steps with damp=0.2,
followed by as many steps as necessary
to achieve the required convergence with damp=0.1
A max number of steps should be included to ensure program termination
The other option allowed should be conjugate gradients:
see Nicola - eventually it could become the default
* Ionic minimization: again SD should be discouraged
A default scheme for simultaneous damped dynamics should be given
(to be tested) for example: zero damp on ions and start with damp=0.5
on electrons to become then 0.1 or perhaps the values should be set
given the forces on the ions
When moving ions and electrons simultaneously an important parameter
is the ratio between electron and ion masses - For minimization it
is better to set up all the ion masses equal - A default value for
the ion masses (considering the defaults for emass and dt) is perhaps
10 AMU (we should do some test to see if 20 AMU is s a safer value)
* Default values for randomization should be given
amprp=0.1 is a decent value - amprp=0.01 is too small
* Car-Parrinello dynamics: the proper masses for the ions, an optimal value
for emass and dt should be set up by the code, based on the smaller atomic
mass and the default value used in the minimizationi
e.g. Amass_default=10 AMU. If the minimum physical AMASS is 20 then
dt=sqrt(2) dt_default and emass should be increased so to keep
emass^2/dt constant
* defaults for the Nose thermostat