quantum-espresso/PHonon/examples/example07/reference/ni_so.phX2.out

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Program PHONON v.6.5 starts on 15Jul2020 at 16:55:31
This program is part of the open-source Quantum ESPRESSO suite
for quantum simulation of materials; please cite
"P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
"P. Giannozzi et al., J. Phys.:Condens. Matter 29 465901 (2017);
URL http://www.quantum-espresso.org",
in publications or presentations arising from this work. More details at
http://www.quantum-espresso.org/quote
Parallel version (MPI), running on 4 processors
MPI processes distributed on 1 nodes
R & G space division: proc/nbgrp/npool/nimage = 4
Fft bands division: nmany = 1
Reading xml data from directory:
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/tempdir/ni_so.save/
IMPORTANT: XC functional enforced from input :
Exchange-correlation= PBE
( 1 4 3 4 0 0 0)
Any further DFT definition will be discarded
Please, verify this is what you really want
Parallelization info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Min 112 40 15 1604 351 82
Max 113 41 16 1607 354 83
Sum 451 163 61 6423 1411 331
Check: negative core charge= -0.000003
Reading collected, re-writing distributed wavefunctions
Phonon calculation in the non-collinear magnetic case;
please cite A. Urru and A. Dal Corso, Phys. Rev. B 100,
045115 (2019) for the theoretical background.
Calculation of q = 0.0000000 0.0000000 0.5000000
Subspace diagonalization in iterative solution of the eigenvalue problem:
a serial algorithm will be used
Parallelization info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Min 112 40 18 1604 351 102
Max 113 41 19 1607 354 104
Sum 451 163 73 6423 1411 411
Title:
phonons of Ni at X/2
bravais-lattice index = 2
lattice parameter (alat) = 6.6500 a.u.
unit-cell volume = 73.5199 (a.u.)^3
number of atoms/cell = 1
number of atomic types = 1
number of electrons = 10.00
number of Kohn-Sham states= 18
kinetic-energy cutoff = 27.0000 Ry
charge density cutoff = 300.0000 Ry
Exchange-correlation= PBE
( 1 4 3 4 0 0 0)
Noncollinear calculation with spin-orbit
celldm(1)= 6.650000 celldm(2)= 0.000000 celldm(3)= 0.000000
celldm(4)= 0.000000 celldm(5)= 0.000000 celldm(6)= 0.000000
crystal axes: (cart. coord. in units of alat)
a(1) = ( -0.500000 0.000000 0.500000 )
a(2) = ( 0.000000 0.500000 0.500000 )
a(3) = ( -0.500000 0.500000 0.000000 )
reciprocal axes: (cart. coord. in units 2 pi/alat)
b(1) = ( -1.000000 -1.000000 1.000000 )
b(2) = ( 1.000000 1.000000 1.000000 )
b(3) = ( -1.000000 1.000000 -1.000000 )
PseudoPot. # 1 for Ni read from file:
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/pseudo/Ni.rel-pbe-nd-rrkjus.UPF
MD5 check sum: fcfb7b43bd341ffe689acf079023b8ab
Pseudo is Ultrasoft + core correction, Zval = 10.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 1195 points, 10 beta functions with:
l(1) = 0
l(2) = 0
l(3) = 1
l(4) = 1
l(5) = 1
l(6) = 1
l(7) = 2
l(8) = 2
l(9) = 2
l(10) = 2
Q(r) pseudized with 0 coefficients
atomic species valence mass pseudopotential
Ni 10.00 58.69340 Ni( 1.00)
16 Sym. Ops., with inversion, found
Cartesian axes
site n. atom positions (alat units)
1 Ni tau( 1) = ( 0.0000000 0.0000000 0.0000000 )
number of k points= 864 Marzari-Vanderbilt smearing, width (Ry)= 0.0200
Number of k-points >= 100: set verbosity='high' to print them.
Dense grid: 6423 G-vectors FFT dimensions: ( 27, 27, 27)
Smooth grid: 1411 G-vectors FFT dimensions: ( 15, 15, 15)
Estimated max dynamical RAM per process > 20.08 MB
Estimated total dynamical RAM > 80.34 MB
Check: negative core charge= -0.000003
The potential is recalculated from file :
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/tempdir/_ph0/ni_so.save/charge-density
Starting wfcs are 12 atomic + 6 random wfcs
Band Structure Calculation
Davidson diagonalization with overlap
ethr = 1.00E-10, avg # of iterations = 13.8
total cpu time spent up to now is 86.9 secs
End of band structure calculation
Number of k-points >= 100: set verbosity='high' to print the bands.
the Fermi energy is 14.2641 ev
Writing output data file /u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/tempdir/_ph0/ni_so.save/
phonons of Ni at X/2
bravais-lattice index = 2
lattice parameter (alat) = 6.6500 a.u.
unit-cell volume = 73.5199 (a.u.)^3
number of atoms/cell = 1
number of atomic types = 1
kinetic-energy cut-off = 27.0000 Ry
charge density cut-off = 300.0000 Ry
convergence threshold = 1.0E-14
beta = 0.7000
number of iterations used = 4
Exchange-correlation= PBE
( 1 4 3 4 0 0 0)
Noncollinear calculation with spin-orbit
celldm(1)= 6.65000 celldm(2)= 0.00000 celldm(3)= 0.00000
celldm(4)= 0.00000 celldm(5)= 0.00000 celldm(6)= 0.00000
crystal axes: (cart. coord. in units of alat)
a(1) = ( -0.5000 0.0000 0.5000 )
a(2) = ( 0.0000 0.5000 0.5000 )
a(3) = ( -0.5000 0.5000 0.0000 )
reciprocal axes: (cart. coord. in units 2 pi/alat)
b(1) = ( -1.0000 -1.0000 1.0000 )
b(2) = ( 1.0000 1.0000 1.0000 )
b(3) = ( -1.0000 1.0000 -1.0000 )
Atoms inside the unit cell:
Cartesian axes
site n. atom mass positions (alat units)
1 Ni 58.6934 tau( 1) = ( 0.00000 0.00000 0.00000 )
Computing dynamical matrix for
q = ( 0.0000000 0.0000000 0.5000000 )
4 Sym.Ops. (no q -> -q+G )
G cutoff = 336.0507 ( 1607 G-vectors) FFT grid: ( 27, 27, 27)
G cutoff = 120.9783 ( 354 G-vectors) smooth grid: ( 15, 15, 15)
number of k points= 864 Marzari-Vanderbilt smearing, width (Ry)= 0.0200
PseudoPot. # 1 for Ni read from file:
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/pseudo/Ni.rel-pbe-nd-rrkjus.UPF
MD5 check sum: fcfb7b43bd341ffe689acf079023b8ab
Pseudo is Ultrasoft + core correction, Zval = 10.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 1195 points, 10 beta functions with:
l(1) = 0
l(2) = 0
l(3) = 1
l(4) = 1
l(5) = 1
l(6) = 1
l(7) = 2
l(8) = 2
l(9) = 2
l(10) = 2
Q(r) pseudized with 0 coefficients
Mode symmetry, C_2v (mm2) point group:
Atomic displacements:
There are 3 irreducible representations
Representation 1 1 modes - To be done
Representation 2 1 modes - To be done
Representation 3 1 modes - To be done
Alpha used in Ewald sum = 2.8000
PHONON : 1m50.16s CPU 1m57.61s WALL
Representation # 1 mode # 1
Self-consistent Calculation
iter # 1 total cpu time : 135.0 secs av.it.: 6.4
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 1.817E-02
iter # 2 total cpu time : 149.0 secs av.it.: 9.4
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 1.075E+01
iter # 3 total cpu time : 166.8 secs av.it.: 9.4
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 2.159E-02
iter # 4 total cpu time : 185.5 secs av.it.: 7.5
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 3.076E-02
iter # 5 total cpu time : 201.0 secs av.it.: 6.9
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 1.645E-04
iter # 6 total cpu time : 212.1 secs av.it.: 6.3
thresh= 1.283E-03 alpha_mix = 0.700 |ddv_scf|^2 = 1.791E-07
iter # 7 total cpu time : 226.5 secs av.it.: 6.6
thresh= 4.232E-05 alpha_mix = 0.700 |ddv_scf|^2 = 8.227E-10
iter # 8 total cpu time : 237.5 secs av.it.: 6.7
thresh= 2.868E-06 alpha_mix = 0.700 |ddv_scf|^2 = 7.339E-12
iter # 9 total cpu time : 251.3 secs av.it.: 7.4
thresh= 2.709E-07 alpha_mix = 0.700 |ddv_scf|^2 = 2.752E-12
iter # 10 total cpu time : 262.8 secs av.it.: 6.5
thresh= 1.659E-07 alpha_mix = 0.700 |ddv_scf|^2 = 1.518E-13
iter # 11 total cpu time : 280.1 secs av.it.: 6.7
thresh= 3.896E-08 alpha_mix = 0.700 |ddv_scf|^2 = 1.812E-13
iter # 12 total cpu time : 290.6 secs av.it.: 6.0
thresh= 4.257E-08 alpha_mix = 0.700 |ddv_scf|^2 = 4.748E-14
iter # 13 total cpu time : 304.3 secs av.it.: 6.5
thresh= 2.179E-08 alpha_mix = 0.700 |ddv_scf|^2 = 6.059E-16
End of self-consistent calculation
Convergence has been achieved
Representation # 2 mode # 2
Self-consistent Calculation
iter # 1 total cpu time : 317.6 secs av.it.: 5.0
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 3.806E-04
iter # 2 total cpu time : 331.3 secs av.it.: 9.2
thresh= 1.951E-03 alpha_mix = 0.700 |ddv_scf|^2 = 2.228E-01
iter # 3 total cpu time : 350.5 secs av.it.: 7.7
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 4.577E-04
iter # 4 total cpu time : 363.6 secs av.it.: 7.1
thresh= 2.139E-03 alpha_mix = 0.700 |ddv_scf|^2 = 6.191E-04
iter # 5 total cpu time : 375.7 secs av.it.: 6.4
thresh= 2.488E-03 alpha_mix = 0.700 |ddv_scf|^2 = 5.753E-06
iter # 6 total cpu time : 390.3 secs av.it.: 6.4
thresh= 2.398E-04 alpha_mix = 0.700 |ddv_scf|^2 = 2.498E-08
iter # 7 total cpu time : 404.5 secs av.it.: 6.8
thresh= 1.581E-05 alpha_mix = 0.700 |ddv_scf|^2 = 1.705E-10
iter # 8 total cpu time : 417.9 secs av.it.: 7.3
thresh= 1.306E-06 alpha_mix = 0.700 |ddv_scf|^2 = 4.048E-12
iter # 9 total cpu time : 430.7 secs av.it.: 7.5
thresh= 2.012E-07 alpha_mix = 0.700 |ddv_scf|^2 = 3.336E-13
iter # 10 total cpu time : 447.5 secs av.it.: 7.0
thresh= 5.775E-08 alpha_mix = 0.700 |ddv_scf|^2 = 6.811E-14
iter # 11 total cpu time : 463.1 secs av.it.: 7.4
thresh= 2.610E-08 alpha_mix = 0.700 |ddv_scf|^2 = 1.201E-14
iter # 12 total cpu time : 481.7 secs av.it.: 7.7
thresh= 1.096E-08 alpha_mix = 0.700 |ddv_scf|^2 = 2.292E-15
End of self-consistent calculation
Convergence has been achieved
Representation # 3 mode # 3
Self-consistent Calculation
iter # 1 total cpu time : 503.4 secs av.it.: 4.4
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 4.224E-06
iter # 2 total cpu time : 519.6 secs av.it.: 8.5
thresh= 2.055E-04 alpha_mix = 0.700 |ddv_scf|^2 = 6.689E-08
iter # 3 total cpu time : 533.2 secs av.it.: 8.7
thresh= 2.586E-05 alpha_mix = 0.700 |ddv_scf|^2 = 2.009E-09
iter # 4 total cpu time : 545.9 secs av.it.: 8.5
thresh= 4.482E-06 alpha_mix = 0.700 |ddv_scf|^2 = 1.640E-10
iter # 5 total cpu time : 558.7 secs av.it.: 8.4
thresh= 1.281E-06 alpha_mix = 0.700 |ddv_scf|^2 = 2.132E-12
iter # 6 total cpu time : 574.3 secs av.it.: 8.4
thresh= 1.460E-07 alpha_mix = 0.700 |ddv_scf|^2 = 4.088E-13
iter # 7 total cpu time : 588.5 secs av.it.: 8.2
thresh= 6.394E-08 alpha_mix = 0.700 |ddv_scf|^2 = 5.846E-14
iter # 8 total cpu time : 609.7 secs av.it.: 8.9
thresh= 2.418E-08 alpha_mix = 0.700 |ddv_scf|^2 = 3.818E-15
End of self-consistent calculation
Convergence has been achieved
Number of q in the star = 4
List of q in the star:
1 0.000000000 0.000000000 0.500000000
2 0.000000000 -0.500000000 0.000000000
3 0.000000000 0.500000000 0.000000000
4 0.000000000 0.000000000 -0.500000000
Diagonalizing the dynamical matrix
q = ( 0.000000000 0.000000000 0.500000000 )
**************************************************************************
freq ( 1) = 4.562872 [THz] = 152.201038 [cm-1]
freq ( 2) = 4.566013 [THz] = 152.305789 [cm-1]
freq ( 3) = 6.727463 [THz] = 224.403996 [cm-1]
**************************************************************************
Mode symmetry, C_2v (mm2) [C_s (m) ] magnetic point group:
freq ( 1- 1) = 152.2 [cm-1] --> B_1 D_3 S_3
freq ( 2- 2) = 152.3 [cm-1] --> A_1 D_1 S_1
freq ( 3- 3) = 224.4 [cm-1] --> B_2 D_4 S_4
init_run : 0.54s CPU 0.55s WALL ( 1 calls)
electrons : 79.71s CPU 86.34s WALL ( 1 calls)
Called by init_run:
wfcinit : 0.00s CPU 0.00s WALL ( 1 calls)
potinit : 0.02s CPU 0.02s WALL ( 1 calls)
hinit0 : 0.39s CPU 0.39s WALL ( 1 calls)
Called by electrons:
c_bands : 79.67s CPU 86.31s WALL ( 1 calls)
v_of_rho : 0.03s CPU 0.03s WALL ( 2 calls)
newd : 0.35s CPU 0.38s WALL ( 3 calls)
Called by c_bands:
init_us_2 : 0.35s CPU 0.39s WALL ( 9504 calls)
cegterg : 71.82s CPU 77.25s WALL ( 883 calls)
Called by *egterg:
cdiaghg : 19.88s CPU 20.22s WALL ( 12814 calls)
h_psi : 314.83s CPU 348.08s WALL ( 146027 calls)
s_psi : 29.48s CPU 31.93s WALL ( 292613 calls)
g_psi : 0.25s CPU 0.25s WALL ( 11950 calls)
Called by h_psi:
h_psi:calbec : 10.73s CPU 11.98s WALL ( 146027 calls)
vloc_psi : 285.62s CPU 315.65s WALL ( 146027 calls)
add_vuspsi : 16.65s CPU 18.54s WALL ( 146027 calls)
General routines
calbec : 24.30s CPU 26.68s WALL ( 316589 calls)
fft : 0.96s CPU 1.00s WALL ( 1796 calls)
ffts : 0.11s CPU 0.12s WALL ( 1592 calls)
fftw : 308.12s CPU 342.31s WALL ( 6745288 calls)
interpolate : 0.10s CPU 0.11s WALL ( 284 calls)
davcio : 1.34s CPU 4.86s WALL ( 74058 calls)
Parallel routines
fft_scatt_xy : 20.55s CPU 22.16s WALL ( 6748676 calls)
fft_scatt_yz : 124.75s CPU 137.37s WALL ( 6748676 calls)
PHONON : 9m15.19s CPU 10m11.96s WALL
INITIALIZATION:
phq_setup : 0.20s CPU 0.22s WALL ( 1 calls)
phq_init : 27.96s CPU 28.31s WALL ( 1 calls)
phq_init : 27.96s CPU 28.31s WALL ( 1 calls)
set_drhoc : 0.19s CPU 0.19s WALL ( 3 calls)
init_vloc : 0.00s CPU 0.00s WALL ( 2 calls)
init_us_1 : 0.70s CPU 0.71s WALL ( 2 calls)
newd : 0.35s CPU 0.38s WALL ( 3 calls)
dvanqq : 0.37s CPU 0.37s WALL ( 1 calls)
drho : 23.43s CPU 23.69s WALL ( 1 calls)
DYNAMICAL MATRIX:
dynmat0 : 3.79s CPU 3.83s WALL ( 1 calls)
phqscf : 445.02s CPU 493.88s WALL ( 1 calls)
dynmatrix : 0.00s CPU 0.06s WALL ( 1 calls)
phqscf : 445.02s CPU 493.88s WALL ( 1 calls)
solve_linter : 440.86s CPU 489.47s WALL ( 3 calls)
drhodv : 4.15s CPU 4.27s WALL ( 3 calls)
dynmat0 : 3.79s CPU 3.83s WALL ( 1 calls)
dynmat_us : 3.65s CPU 3.68s WALL ( 1 calls)
d2ionq : 0.00s CPU 0.00s WALL ( 1 calls)
dynmatcc : 0.14s CPU 0.15s WALL ( 1 calls)
dynmat_us : 3.65s CPU 3.68s WALL ( 1 calls)
addusdynmat : 0.05s CPU 0.05s WALL ( 1 calls)
phqscf : 445.02s CPU 493.88s WALL ( 1 calls)
solve_linter : 440.86s CPU 489.47s WALL ( 3 calls)
solve_linter : 440.86s CPU 489.47s WALL ( 3 calls)
dvqpsi_us : 14.86s CPU 15.51s WALL ( 1296 calls)
ortho : 11.96s CPU 12.29s WALL ( 14256 calls)
cgsolve : 330.94s CPU 363.49s WALL ( 14256 calls)
incdrhoscf : 36.14s CPU 40.34s WALL ( 14256 calls)
addusddens : 1.83s CPU 1.84s WALL ( 36 calls)
vpsifft : 27.68s CPU 31.67s WALL ( 12960 calls)
dv_of_drho : 0.49s CPU 0.50s WALL ( 33 calls)
mix_pot : 0.36s CPU 2.81s WALL ( 33 calls)
psymdvscf : 0.14s CPU 0.15s WALL ( 33 calls)
newdq : 4.23s CPU 4.25s WALL ( 66 calls)
adddvscf : 8.14s CPU 8.80s WALL ( 12960 calls)
drhodvus : 0.00s CPU 0.00s WALL ( 3 calls)
dvqpsi_us : 14.86s CPU 15.51s WALL ( 1296 calls)
dvqpsi_us_on : 10.53s CPU 10.61s WALL ( 1296 calls)
cgsolve : 330.94s CPU 363.49s WALL ( 14256 calls)
ch_psi : 322.12s CPU 354.13s WALL ( 132330 calls)
ch_psi : 322.12s CPU 354.13s WALL ( 132330 calls)
h_psi : 314.83s CPU 348.08s WALL ( 146027 calls)
last : 37.93s CPU 40.65s WALL ( 132330 calls)
h_psi : 314.83s CPU 348.08s WALL ( 146027 calls)
add_vuspsi : 16.65s CPU 18.54s WALL ( 146027 calls)
incdrhoscf : 36.14s CPU 40.34s WALL ( 14256 calls)
drhodvus : 0.00s CPU 0.00s WALL ( 3 calls)
General routines
calbec : 24.30s CPU 26.68s WALL ( 316589 calls)
fft : 0.96s CPU 1.00s WALL ( 1796 calls)
ffts : 0.11s CPU 0.12s WALL ( 1592 calls)
fftw : 308.12s CPU 342.31s WALL ( 6745288 calls)
davcio : 1.34s CPU 4.86s WALL ( 74058 calls)
write_rec : 0.09s CPU 1.47s WALL ( 36 calls)
PHONON : 9m15.19s CPU 10m11.96s WALL
This run was terminated on: 17: 5:43 15Jul2020
=------------------------------------------------------------------------------=
JOB DONE.
=------------------------------------------------------------------------------=