quantum-espresso/PHonon/examples/example07/reference/ni.phX2.out

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Program PHONON v.6.5 starts on 15Jul2020 at 16:38: 7
This program is part of the open-source Quantum ESPRESSO suite
for quantum simulation of materials; please cite
"P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
"P. Giannozzi et al., J. Phys.:Condens. Matter 29 465901 (2017);
URL http://www.quantum-espresso.org",
in publications or presentations arising from this work. More details at
http://www.quantum-espresso.org/quote
Parallel version (MPI), running on 4 processors
MPI processes distributed on 1 nodes
R & G space division: proc/nbgrp/npool/nimage = 4
Fft bands division: nmany = 1
Reading xml data from directory:
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/tempdir/nickel.save/
file Ni.pbe-nd-rrkjus.UPF: wavefunction(s) 4S renormalized
IMPORTANT: XC functional enforced from input :
Exchange-correlation= PBE
( 1 4 3 4 0 0 0)
Any further DFT definition will be discarded
Please, verify this is what you really want
Parallelization info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Min 112 40 15 1604 351 82
Max 113 41 16 1607 354 83
Sum 451 163 61 6423 1411 331
Check: negative core charge= -0.000020
Reading collected, re-writing distributed wavefunctions
Phonon calculation in the non-collinear magnetic case;
please cite A. Urru and A. Dal Corso, Phys. Rev. B 100,
045115 (2019) for the theoretical background.
Calculation of q = 0.0000000 0.0000000 0.5000000
Subspace diagonalization in iterative solution of the eigenvalue problem:
a serial algorithm will be used
Parallelization info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Min 112 40 18 1604 351 102
Max 113 41 19 1607 354 104
Sum 451 163 73 6423 1411 411
Title:
phonons of Ni at X/2
bravais-lattice index = 2
lattice parameter (alat) = 6.6500 a.u.
unit-cell volume = 73.5199 (a.u.)^3
number of atoms/cell = 1
number of atomic types = 1
number of electrons = 10.00
number of Kohn-Sham states= 18
kinetic-energy cutoff = 27.0000 Ry
charge density cutoff = 300.0000 Ry
Exchange-correlation= PBE
( 1 4 3 4 0 0 0)
Noncollinear calculation without spin-orbit
celldm(1)= 6.650000 celldm(2)= 0.000000 celldm(3)= 0.000000
celldm(4)= 0.000000 celldm(5)= 0.000000 celldm(6)= 0.000000
crystal axes: (cart. coord. in units of alat)
a(1) = ( -0.500000 0.000000 0.500000 )
a(2) = ( 0.000000 0.500000 0.500000 )
a(3) = ( -0.500000 0.500000 0.000000 )
reciprocal axes: (cart. coord. in units 2 pi/alat)
b(1) = ( -1.000000 -1.000000 1.000000 )
b(2) = ( 1.000000 1.000000 1.000000 )
b(3) = ( -1.000000 1.000000 -1.000000 )
PseudoPot. # 1 for Ni read from file:
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/pseudo/Ni.pbe-nd-rrkjus.UPF
MD5 check sum: d71bc9c4c8adef96ad6fe9664ede368e
Pseudo is Ultrasoft + core correction, Zval = 10.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 1203 points, 6 beta functions with:
l(1) = 0
l(2) = 0
l(3) = 1
l(4) = 1
l(5) = 2
l(6) = 2
Q(r) pseudized with 0 coefficients
atomic species valence mass pseudopotential
Ni 10.00 58.69340 Ni( 1.00)
16 Sym. Ops., with inversion, found
Cartesian axes
site n. atom positions (alat units)
1 Ni tau( 1) = ( 0.0000000 0.0000000 0.0000000 )
number of k points= 864 Marzari-Vanderbilt smearing, width (Ry)= 0.0200
Number of k-points >= 100: set verbosity='high' to print them.
Dense grid: 6423 G-vectors FFT dimensions: ( 27, 27, 27)
Smooth grid: 1411 G-vectors FFT dimensions: ( 15, 15, 15)
Estimated max dynamical RAM per process > 7.36 MB
Estimated total dynamical RAM > 29.46 MB
Check: negative core charge= -0.000020
The potential is recalculated from file :
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/tempdir/_ph0/nickel.save/charge-density
Starting wfcs are 12 atomic + 6 random wfcs
Band Structure Calculation
Davidson diagonalization with overlap
ethr = 1.00E-10, avg # of iterations = 14.2
total cpu time spent up to now is 75.3 secs
End of band structure calculation
Number of k-points >= 100: set verbosity='high' to print the bands.
the Fermi energy is 14.2603 ev
Writing output data file /u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/tempdir/_ph0/nickel.save/
Fixed quantization axis for GGA: -0.000000 0.479426 0.877583
phonons of Ni at X/2
bravais-lattice index = 2
lattice parameter (alat) = 6.6500 a.u.
unit-cell volume = 73.5199 (a.u.)^3
number of atoms/cell = 1
number of atomic types = 1
kinetic-energy cut-off = 27.0000 Ry
charge density cut-off = 300.0000 Ry
convergence threshold = 1.0E-16
beta = 0.7000
number of iterations used = 4
Exchange-correlation= PBE
( 1 4 3 4 0 0 0)
Noncollinear calculation without spin-orbit
celldm(1)= 6.65000 celldm(2)= 0.00000 celldm(3)= 0.00000
celldm(4)= 0.00000 celldm(5)= 0.00000 celldm(6)= 0.00000
crystal axes: (cart. coord. in units of alat)
a(1) = ( -0.5000 0.0000 0.5000 )
a(2) = ( 0.0000 0.5000 0.5000 )
a(3) = ( -0.5000 0.5000 0.0000 )
reciprocal axes: (cart. coord. in units 2 pi/alat)
b(1) = ( -1.0000 -1.0000 1.0000 )
b(2) = ( 1.0000 1.0000 1.0000 )
b(3) = ( -1.0000 1.0000 -1.0000 )
Atoms inside the unit cell:
Cartesian axes
site n. atom mass positions (alat units)
1 Ni 58.6934 tau( 1) = ( 0.00000 0.00000 0.00000 )
Computing dynamical matrix for
q = ( 0.0000000 0.0000000 0.5000000 )
4 Sym.Ops. (no q -> -q+G )
G cutoff = 336.0507 ( 1607 G-vectors) FFT grid: ( 27, 27, 27)
G cutoff = 120.9783 ( 354 G-vectors) smooth grid: ( 15, 15, 15)
number of k points= 864 Marzari-Vanderbilt smearing, width (Ry)= 0.0200
PseudoPot. # 1 for Ni read from file:
/u/a/aurru/Documents/Espresso/QEF_fork_Urru/q-e/pseudo/Ni.pbe-nd-rrkjus.UPF
MD5 check sum: d71bc9c4c8adef96ad6fe9664ede368e
Pseudo is Ultrasoft + core correction, Zval = 10.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 1203 points, 6 beta functions with:
l(1) = 0
l(2) = 0
l(3) = 1
l(4) = 1
l(5) = 2
l(6) = 2
Q(r) pseudized with 0 coefficients
Mode symmetry, C_2v (mm2) point group:
Atomic displacements:
There are 3 irreducible representations
Representation 1 1 modes - To be done
Representation 2 1 modes - To be done
Representation 3 1 modes - To be done
Alpha used in Ewald sum = 2.8000
PHONON : 1m17.87s CPU 1m24.22s WALL
Representation # 1 mode # 1
Self-consistent Calculation
iter # 1 total cpu time : 98.2 secs av.it.: 5.8
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 1.808E-02
iter # 2 total cpu time : 113.5 secs av.it.: 8.3
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 1.047E+01
iter # 3 total cpu time : 131.0 secs av.it.: 8.3
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 2.232E-02
iter # 4 total cpu time : 145.8 secs av.it.: 6.8
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 3.197E-02
iter # 5 total cpu time : 159.9 secs av.it.: 6.2
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 1.916E-04
iter # 6 total cpu time : 173.2 secs av.it.: 5.7
thresh= 1.384E-03 alpha_mix = 0.700 |ddv_scf|^2 = 3.724E-07
iter # 7 total cpu time : 185.6 secs av.it.: 5.8
thresh= 6.102E-05 alpha_mix = 0.700 |ddv_scf|^2 = 3.754E-10
iter # 8 total cpu time : 200.6 secs av.it.: 6.4
thresh= 1.938E-06 alpha_mix = 0.700 |ddv_scf|^2 = 2.805E-11
iter # 9 total cpu time : 215.5 secs av.it.: 6.4
thresh= 5.296E-07 alpha_mix = 0.700 |ddv_scf|^2 = 1.476E-13
iter # 10 total cpu time : 230.9 secs av.it.: 7.4
thresh= 3.841E-08 alpha_mix = 0.700 |ddv_scf|^2 = 4.364E-14
iter # 11 total cpu time : 245.1 secs av.it.: 6.7
thresh= 2.089E-08 alpha_mix = 0.700 |ddv_scf|^2 = 1.612E-14
iter # 12 total cpu time : 259.2 secs av.it.: 6.0
thresh= 1.270E-08 alpha_mix = 0.700 |ddv_scf|^2 = 6.795E-15
iter # 13 total cpu time : 273.5 secs av.it.: 6.1
thresh= 8.243E-09 alpha_mix = 0.700 |ddv_scf|^2 = 8.564E-17
iter # 14 total cpu time : 288.4 secs av.it.: 6.7
thresh= 9.254E-10 alpha_mix = 0.700 |ddv_scf|^2 = 4.805E-18
End of self-consistent calculation
Convergence has been achieved
Representation # 2 mode # 2
Self-consistent Calculation
iter # 1 total cpu time : 300.9 secs av.it.: 4.2
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 4.370E-06
iter # 2 total cpu time : 317.9 secs av.it.: 7.8
thresh= 2.090E-04 alpha_mix = 0.700 |ddv_scf|^2 = 7.111E-08
iter # 3 total cpu time : 334.8 secs av.it.: 8.0
thresh= 2.667E-05 alpha_mix = 0.700 |ddv_scf|^2 = 1.415E-09
iter # 4 total cpu time : 349.4 secs av.it.: 8.0
thresh= 3.762E-06 alpha_mix = 0.700 |ddv_scf|^2 = 6.038E-11
iter # 5 total cpu time : 365.4 secs av.it.: 8.3
thresh= 7.770E-07 alpha_mix = 0.700 |ddv_scf|^2 = 8.869E-13
iter # 6 total cpu time : 382.6 secs av.it.: 8.3
thresh= 9.418E-08 alpha_mix = 0.700 |ddv_scf|^2 = 2.532E-14
iter # 7 total cpu time : 394.1 secs av.it.: 8.3
thresh= 1.591E-08 alpha_mix = 0.700 |ddv_scf|^2 = 4.668E-15
iter # 8 total cpu time : 412.3 secs av.it.: 8.7
thresh= 6.832E-09 alpha_mix = 0.700 |ddv_scf|^2 = 5.086E-17
iter # 9 total cpu time : 427.6 secs av.it.: 8.4
thresh= 7.131E-10 alpha_mix = 0.700 |ddv_scf|^2 = 1.246E-18
End of self-consistent calculation
Convergence has been achieved
Representation # 3 mode # 3
Self-consistent Calculation
iter # 1 total cpu time : 441.8 secs av.it.: 4.4
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 5.354E-05
iter # 2 total cpu time : 455.4 secs av.it.: 8.3
thresh= 7.317E-04 alpha_mix = 0.700 |ddv_scf|^2 = 2.848E-02
iter # 3 total cpu time : 469.3 secs av.it.: 5.9
thresh= 1.000E-02 alpha_mix = 0.700 |ddv_scf|^2 = 7.157E-05
iter # 4 total cpu time : 482.6 secs av.it.: 6.5
thresh= 8.460E-04 alpha_mix = 0.700 |ddv_scf|^2 = 7.425E-05
iter # 5 total cpu time : 491.5 secs av.it.: 5.8
thresh= 8.617E-04 alpha_mix = 0.700 |ddv_scf|^2 = 3.650E-06
iter # 6 total cpu time : 504.3 secs av.it.: 5.9
thresh= 1.911E-04 alpha_mix = 0.700 |ddv_scf|^2 = 3.567E-08
iter # 7 total cpu time : 514.3 secs av.it.: 6.1
thresh= 1.889E-05 alpha_mix = 0.700 |ddv_scf|^2 = 5.069E-10
iter # 8 total cpu time : 527.7 secs av.it.: 6.5
thresh= 2.252E-06 alpha_mix = 0.700 |ddv_scf|^2 = 1.080E-12
iter # 9 total cpu time : 543.9 secs av.it.: 7.6
thresh= 1.039E-07 alpha_mix = 0.700 |ddv_scf|^2 = 1.893E-14
iter # 10 total cpu time : 559.7 secs av.it.: 8.2
thresh= 1.376E-08 alpha_mix = 0.700 |ddv_scf|^2 = 2.174E-15
iter # 11 total cpu time : 575.6 secs av.it.: 8.6
thresh= 4.662E-09 alpha_mix = 0.700 |ddv_scf|^2 = 5.070E-17
iter # 12 total cpu time : 592.4 secs av.it.: 8.4
thresh= 7.120E-10 alpha_mix = 0.700 |ddv_scf|^2 = 3.223E-18
End of self-consistent calculation
Convergence has been achieved
Number of q in the star = 4
List of q in the star:
1 0.000000000 0.000000000 0.500000000
2 -0.500000000 0.000000000 0.000000000
3 0.500000000 0.000000000 0.000000000
4 0.000000000 0.000000000 -0.500000000
Diagonalizing the dynamical matrix
q = ( 0.000000000 0.000000000 0.500000000 )
**************************************************************************
freq ( 1) = 4.550355 [THz] = 151.783513 [cm-1]
freq ( 2) = 4.550439 [THz] = 151.786297 [cm-1]
freq ( 3) = 6.824990 [THz] = 227.657165 [cm-1]
**************************************************************************
Mode symmetry, C_2v (mm2) [C_s (m) ] magnetic point group:
freq ( 1- 1) = 151.8 [cm-1] --> A_1 D_1 S_1
freq ( 2- 2) = 151.8 [cm-1] --> B_2 D_4 S_4
freq ( 3- 3) = 227.7 [cm-1] --> B_1 D_3 S_3
init_run : 0.17s CPU 0.18s WALL ( 1 calls)
electrons : 69.44s CPU 75.10s WALL ( 1 calls)
Called by init_run:
wfcinit : 0.00s CPU 0.00s WALL ( 1 calls)
potinit : 0.01s CPU 0.02s WALL ( 1 calls)
hinit0 : 0.14s CPU 0.14s WALL ( 1 calls)
Called by electrons:
c_bands : 69.41s CPU 75.08s WALL ( 1 calls)
v_of_rho : 0.02s CPU 0.03s WALL ( 2 calls)
newd : 0.03s CPU 0.03s WALL ( 3 calls)
Called by c_bands:
init_us_2 : 0.30s CPU 0.33s WALL ( 9936 calls)
cegterg : 62.69s CPU 67.45s WALL ( 892 calls)
Called by *egterg:
cdiaghg : 17.70s CPU 18.14s WALL ( 13123 calls)
h_psi : 342.07s CPU 382.79s WALL ( 145825 calls)
s_psi : 15.14s CPU 16.96s WALL ( 292755 calls)
g_psi : 0.18s CPU 0.19s WALL ( 12259 calls)
Called by h_psi:
h_psi:calbec : 8.89s CPU 10.02s WALL ( 145825 calls)
vloc_psi : 323.54s CPU 361.91s WALL ( 145825 calls)
add_vuspsi : 7.63s CPU 8.69s WALL ( 145825 calls)
General routines
calbec : 19.31s CPU 21.53s WALL ( 317595 calls)
fft : 0.72s CPU 0.78s WALL ( 1892 calls)
ffts : 0.11s CPU 0.12s WALL ( 1608 calls)
fftw : 353.71s CPU 397.06s WALL ( 6892944 calls)
interpolate : 0.11s CPU 0.12s WALL ( 300 calls)
davcio : 1.52s CPU 5.37s WALL ( 78404 calls)
Parallel routines
fft_scatt_xy : 23.52s CPU 25.39s WALL ( 6896444 calls)
fft_scatt_yz : 141.68s CPU 157.32s WALL ( 6896444 calls)
PHONON : 8m46.83s CPU 9m53.37s WALL
INITIALIZATION:
phq_setup : 0.07s CPU 0.09s WALL ( 1 calls)
phq_init : 6.86s CPU 7.14s WALL ( 1 calls)
phq_init : 6.86s CPU 7.14s WALL ( 1 calls)
set_drhoc : 0.15s CPU 0.15s WALL ( 3 calls)
init_vloc : 0.00s CPU 0.00s WALL ( 2 calls)
init_us_1 : 0.34s CPU 0.34s WALL ( 2 calls)
newd : 0.03s CPU 0.03s WALL ( 3 calls)
dvanqq : 0.07s CPU 0.07s WALL ( 1 calls)
drho : 5.39s CPU 5.64s WALL ( 1 calls)
DYNAMICAL MATRIX:
dynmat0 : 1.19s CPU 1.22s WALL ( 1 calls)
phqscf : 448.95s CPU 508.63s WALL ( 1 calls)
dynmatrix : 0.00s CPU 0.05s WALL ( 1 calls)
phqscf : 448.95s CPU 508.63s WALL ( 1 calls)
solve_linter : 447.70s CPU 507.21s WALL ( 3 calls)
drhodv : 1.24s CPU 1.30s WALL ( 3 calls)
dynmat0 : 1.19s CPU 1.22s WALL ( 1 calls)
dynmat_us : 1.08s CPU 1.09s WALL ( 1 calls)
d2ionq : 0.00s CPU 0.00s WALL ( 1 calls)
dynmatcc : 0.12s CPU 0.12s WALL ( 1 calls)
dynmat_us : 1.08s CPU 1.09s WALL ( 1 calls)
addusdynmat : 0.00s CPU 0.00s WALL ( 1 calls)
phqscf : 448.95s CPU 508.63s WALL ( 1 calls)
solve_linter : 447.70s CPU 507.21s WALL ( 3 calls)
solve_linter : 447.70s CPU 507.21s WALL ( 3 calls)
dvqpsi_us : 7.63s CPU 8.33s WALL ( 1296 calls)
ortho : 6.83s CPU 7.27s WALL ( 15120 calls)
cgsolve : 346.14s CPU 387.37s WALL ( 15120 calls)
incdrhoscf : 42.74s CPU 47.90s WALL ( 15120 calls)
addusddens : 0.64s CPU 0.65s WALL ( 38 calls)
vpsifft : 34.01s CPU 39.17s WALL ( 13824 calls)
dv_of_drho : 0.55s CPU 0.58s WALL ( 35 calls)
mix_pot : 0.49s CPU 3.05s WALL ( 35 calls)
psymdvscf : 0.17s CPU 0.18s WALL ( 35 calls)
newdq : 1.25s CPU 1.27s WALL ( 70 calls)
adddvscf : 3.47s CPU 3.86s WALL ( 13824 calls)
drhodvus : 0.00s CPU 0.00s WALL ( 3 calls)
dvqpsi_us : 7.63s CPU 8.33s WALL ( 1296 calls)
dvqpsi_us_on : 2.55s CPU 2.62s WALL ( 1296 calls)
cgsolve : 346.14s CPU 387.37s WALL ( 15120 calls)
ch_psi : 339.04s CPU 379.48s WALL ( 131810 calls)
ch_psi : 339.04s CPU 379.48s WALL ( 131810 calls)
h_psi : 342.07s CPU 382.79s WALL ( 145825 calls)
last : 27.73s CPU 30.75s WALL ( 131810 calls)
h_psi : 342.07s CPU 382.79s WALL ( 145825 calls)
add_vuspsi : 7.63s CPU 8.69s WALL ( 145825 calls)
incdrhoscf : 42.74s CPU 47.90s WALL ( 15120 calls)
drhodvus : 0.00s CPU 0.00s WALL ( 3 calls)
General routines
calbec : 19.31s CPU 21.53s WALL ( 317595 calls)
fft : 0.72s CPU 0.78s WALL ( 1892 calls)
ffts : 0.11s CPU 0.12s WALL ( 1608 calls)
fftw : 353.71s CPU 397.06s WALL ( 6892944 calls)
davcio : 1.52s CPU 5.37s WALL ( 78404 calls)
write_rec : 0.07s CPU 1.13s WALL ( 38 calls)
PHONON : 8m46.83s CPU 9m53.37s WALL
This run was terminated on: 16:48: 0 15Jul2020
=------------------------------------------------------------------------------=
JOB DONE.
=------------------------------------------------------------------------------=