mirror of https://github.com/abinit/abinit.git
1116 lines
61 KiB
Plaintext
1116 lines
61 KiB
Plaintext
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.Version 10.1.4.5 of ABINIT, released Sep 2024.
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.(MPI version, prepared for a x86_64_linux_gnu13.2 computer)
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.Copyright (C) 1998-2025 ABINIT group .
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ABINIT comes with ABSOLUTELY NO WARRANTY.
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It is free software, and you are welcome to redistribute it
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under certain conditions (GNU General Public License,
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see ~abinit/COPYING or http://www.gnu.org/copyleft/gpl.txt).
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ABINIT is a project of the Universite Catholique de Louvain,
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Corning Inc. and other collaborators, see ~abinit/doc/developers/contributors.txt .
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Please read https://docs.abinit.org/theory/acknowledgments for suggested
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acknowledgments of the ABINIT effort.
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For more information, see https://www.abinit.org .
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.Starting date : Fri 13 Sep 2024.
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- ( at 19h06 )
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- input file -> /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/TestBot_MPI1/tutorial_tpositron_2/tpositron_2.abi
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- output file -> tpositron_2.abo
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- root for input files -> tpositron_2i
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- root for output files -> tpositron_2o
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- inpspheads : Reading pseudopotential header in XML form from
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- /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pw_std/Si.xml
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DATASET 1 : space group F-4 3 m (#216); Bravais cF (face-center cubic)
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================================================================================
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Values of the parameters that define the memory need for DATASET 1.
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intxc = 0 ionmov = 0 iscf = 17 lmnmax = 8
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lnmax = 4 mgfft = 40 mpssoang = 2 mqgrid = 3001
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natom = 15 nloc_mem = 2 nspden = 1 nspinor = 1
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nsppol = 1 nsym = 24 n1xccc = 1 ntypat = 1
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occopt = 1 xclevel = 1
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- mband = 36 mffmem = 1 mkmem = 3
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mpw = 1173 nfft = 64000 nkpt = 3
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PAW method is used; the additional fine FFT grid is defined by:
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mgfftf= 54 nfftf = 157464
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================================================================================
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P This job should need less than 36.645 Mbytes of memory.
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Rough estimation (10% accuracy) of disk space for files :
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_ WF disk file : 1.935 Mbytes ; DEN or POT disk file : 1.203 Mbytes.
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================================================================================
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DATASET 2 : space group F-4 3 m (#216); Bravais cF (face-center cubic)
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================================================================================
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Values of the parameters that define the memory need for DATASET 2.
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intxc = 0 ionmov = 0 iscf = 17 lmnmax = 8
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lnmax = 4 mgfft = 40 mpssoang = 2 mqgrid = 3001
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natom = 15 nloc_mem = 2 nspden = 1 nspinor = 1
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nsppol = 1 nsym = 24 n1xccc = 1 ntypat = 1
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occopt = 1 xclevel = 1
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- mband = 36 mffmem = 1 mkmem = 1
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mpw = 1139 nfft = 64000 nkpt = 1
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PAW method is used; the additional fine FFT grid is defined by:
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mgfftf= 54 nfftf = 157464
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================================================================================
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P This job should need less than 35.061 Mbytes of memory.
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Rough estimation (10% accuracy) of disk space for files :
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_ WF disk file : 0.628 Mbytes ; DEN or POT disk file : 1.203 Mbytes.
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================================================================================
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--------------------------------------------------------------------------------
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------------- Echo of variables that govern the present computation ------------
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--------------------------------------------------------------------------------
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-
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- outvars: echo of selected default values
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- iomode0 = 0 , fftalg0 =512 , wfoptalg0 = 10
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-
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- outvars: echo of global parameters not present in the input file
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- max_nthreads = 0
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-
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-outvars: echo values of preprocessed input variables --------
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acell 1.0261212902E+01 1.0261212902E+01 1.0261212902E+01 Bohr
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amu 2.80855000E+01
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chkprim 0
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ecut 8.00000000E+00 Hartree
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- fftalg 512
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getden1 0
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getden2 1
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istwfk1 2 3 7
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istwfk2 2
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ixc -1012
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jdtset 1 2
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kpt1 0.00000000E+00 0.00000000E+00 0.00000000E+00
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5.00000000E-01 0.00000000E+00 0.00000000E+00
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5.00000000E-01 5.00000000E-01 0.00000000E+00
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kpt2 0.00000000E+00 0.00000000E+00 0.00000000E+00
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kptopt1 1
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kptopt2 0
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kptrlatt 2 0 0 0 2 0 0 0 2
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kptrlen1 2.90230929E+01
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kptrlen2 3.00000000E+01
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P mkmem1 3
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P mkmem2 1
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natom 15
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nband1 36
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nband2 36
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ndtset 2
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ngfft 40 40 40
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ngfftdg 54 54 54
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nkpt1 3
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nkpt2 1
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nstep 50
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nsym 24
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ntypat 1
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occ1 2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
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2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
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2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
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2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
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2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
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0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
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occ2 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000
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0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
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0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
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0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
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0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
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0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
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optforces 0
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optstress 0
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pawecutdg 1.50000000E+01 Hartree
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positron1 0
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positron2 1
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prteig 0
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prtwf 0
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rprim 0.0000000000E+00 1.0000000000E+00 1.0000000000E+00
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1.0000000000E+00 0.0000000000E+00 1.0000000000E+00
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1.0000000000E+00 1.0000000000E+00 0.0000000000E+00
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shiftk1 0.00000000E+00 0.00000000E+00 0.00000000E+00
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shiftk2 5.00000000E-01 5.00000000E-01 5.00000000E-01
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spgroup 216
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symrel 1 0 0 0 1 0 0 0 1 0 -1 1 0 -1 0 1 -1 0
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-1 0 0 -1 0 1 -1 1 0 0 1 -1 1 0 -1 0 0 -1
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-1 0 0 -1 1 0 -1 0 1 0 -1 1 1 -1 0 0 -1 0
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1 0 0 0 0 1 0 1 0 0 1 -1 0 0 -1 1 0 -1
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-1 0 1 -1 1 0 -1 0 0 0 -1 0 1 -1 0 0 -1 1
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1 0 -1 0 0 -1 0 1 -1 0 1 0 0 0 1 1 0 0
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1 0 -1 0 1 -1 0 0 -1 0 -1 0 0 -1 1 1 -1 0
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-1 0 1 -1 0 0 -1 1 0 0 1 0 1 0 0 0 0 1
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0 0 -1 0 1 -1 1 0 -1 1 -1 0 0 -1 1 0 -1 0
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0 0 1 1 0 0 0 1 0 -1 1 0 -1 0 0 -1 0 1
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0 0 1 0 1 0 1 0 0 1 -1 0 0 -1 0 0 -1 1
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0 0 -1 1 0 -1 0 1 -1 -1 1 0 -1 0 1 -1 0 0
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tnons 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 -0.0000000
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0.5000000 0.0000000 -0.0000000 -0.0000000 0.0000000 0.5000000
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0.5000000 0.0000000 -0.0000000 0.0000000 0.5000000 -0.0000000
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0.0000000 0.0000000 0.0000000 -0.0000000 0.0000000 0.5000000
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0.5000000 0.0000000 -0.0000000 0.0000000 0.5000000 -0.0000000
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-0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000
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-0.0000000 0.0000000 0.5000000 0.0000000 0.5000000 -0.0000000
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0.5000000 0.0000000 -0.0000000 0.0000000 0.0000000 0.0000000
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-0.0000000 0.0000000 0.5000000 0.0000000 0.5000000 -0.0000000
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0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 -0.0000000
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0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 -0.0000000
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-0.0000000 0.0000000 0.5000000 0.5000000 0.0000000 -0.0000000
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tolvrs 1.00000000E-08
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typat 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
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useylm 1
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wtk1 0.12500 0.50000 0.37500
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wtk2 1.00000
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xangst 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
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2.7150000000E+00 2.7150000000E+00 -2.4293545990E-33
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2.7150000000E+00 -2.4293545990E-33 2.7150000000E+00
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-2.4293545990E-33 2.7150000000E+00 2.7150000000E+00
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5.4300000000E+00 2.7150000000E+00 2.7150000000E+00
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2.7150000000E+00 5.4300000000E+00 2.7150000000E+00
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2.7150000000E+00 2.7150000000E+00 5.4300000000E+00
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5.4300000000E+00 5.4300000000E+00 5.4300000000E+00
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1.3575000000E+00 1.3575000000E+00 1.3575000000E+00
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4.0725000000E+00 4.0725000000E+00 1.3575000000E+00
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4.0725000000E+00 1.3575000000E+00 4.0725000000E+00
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1.3575000000E+00 4.0725000000E+00 4.0725000000E+00
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6.7875000000E+00 4.0725000000E+00 4.0725000000E+00
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4.0725000000E+00 6.7875000000E+00 4.0725000000E+00
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4.0725000000E+00 4.0725000000E+00 6.7875000000E+00
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xcart 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
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5.1306064508E+00 5.1306064508E+00 -4.5908148717E-33
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5.1306064508E+00 -4.5908148717E-33 5.1306064508E+00
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-4.5908148717E-33 5.1306064508E+00 5.1306064508E+00
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1.0261212902E+01 5.1306064508E+00 5.1306064508E+00
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5.1306064508E+00 1.0261212902E+01 5.1306064508E+00
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5.1306064508E+00 5.1306064508E+00 1.0261212902E+01
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1.0261212902E+01 1.0261212902E+01 1.0261212902E+01
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2.5653032254E+00 2.5653032254E+00 2.5653032254E+00
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7.6959096762E+00 7.6959096762E+00 2.5653032254E+00
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7.6959096762E+00 2.5653032254E+00 7.6959096762E+00
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2.5653032254E+00 7.6959096762E+00 7.6959096762E+00
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1.2826516127E+01 7.6959096762E+00 7.6959096762E+00
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7.6959096762E+00 1.2826516127E+01 7.6959096762E+00
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7.6959096762E+00 7.6959096762E+00 1.2826516127E+01
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xred 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
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-9.8857149303E-18 9.8857149303E-18 5.0000000000E-01
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9.8857149303E-18 5.0000000000E-01 -9.8857149303E-18
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5.0000000000E-01 9.8857149303E-18 -9.8857149303E-18
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9.8857149303E-18 5.0000000000E-01 5.0000000000E-01
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5.0000000000E-01 9.8857149303E-18 5.0000000000E-01
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5.0000000000E-01 5.0000000000E-01 -1.9771429861E-17
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5.0000000000E-01 5.0000000000E-01 5.0000000000E-01
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1.2500000000E-01 1.2500000000E-01 1.2500000000E-01
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1.2500000000E-01 1.2500000000E-01 6.2500000000E-01
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1.2500000000E-01 6.2500000000E-01 1.2500000000E-01
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6.2500000000E-01 1.2500000000E-01 1.2500000000E-01
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1.2500000000E-01 6.2500000000E-01 6.2500000000E-01
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6.2500000000E-01 1.2500000000E-01 6.2500000000E-01
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6.2500000000E-01 6.2500000000E-01 1.2500000000E-01
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znucl 14.00000
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================================================================================
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chkinp: Checking input parameters for consistency, jdtset= 1.
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chkinp: Checking input parameters for consistency, jdtset= 2.
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================================================================================
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== DATASET 1 ==================================================================
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- mpi_nproc: 1, omp_nthreads: -1 (-1 if OMP is not activated)
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--- !DatasetInfo
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iteration_state: {dtset: 1, }
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dimensions: {natom: 15, nkpt: 3, mband: 36, nsppol: 1, nspinor: 1, nspden: 1, mpw: 1173, }
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cutoff_energies: {ecut: 8.0, pawecutdg: 15.0, }
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electrons: {nelect: 6.00000000E+01, charge: 0.00000000E+00, occopt: 1.00000000E+00, tsmear: 1.00000000E-02, }
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meta: {optdriver: 0, ionmov: 0, optcell: 0, iscf: 17, paral_kgb: 0, }
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...
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Real(R)+Recip(G) space primitive vectors, cartesian coordinates (Bohr,Bohr^-1):
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R(1)= 0.0000000 10.2612129 10.2612129 G(1)= -0.0487272 0.0487272 0.0487272
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R(2)= 10.2612129 0.0000000 10.2612129 G(2)= 0.0487272 -0.0487272 0.0487272
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R(3)= 10.2612129 10.2612129 0.0000000 G(3)= 0.0487272 0.0487272 -0.0487272
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Unit cell volume ucvol= 2.1608573E+03 bohr^3
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Angles (23,13,12)= 6.00000000E+01 6.00000000E+01 6.00000000E+01 degrees
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Coarse grid specifications (used for wave-functions):
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getcut: wavevector= 0.0000 0.0000 0.0000 ngfft= 40 40 40
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ecut(hartree)= 8.000 => boxcut(ratio)= 2.16489
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Fine grid specifications (used for densities):
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getcut: wavevector= 0.0000 0.0000 0.0000 ngfft= 54 54 54
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ecut(hartree)= 15.000 => boxcut(ratio)= 2.13510
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--- Pseudopotential description ------------------------------------------------
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- pspini: atom type 1 psp file is /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pw_std/Si.xml
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- pspatm: opening atomic psp file /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pw_std/Si.xml
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- pspatm : Reading pseudopotential header in XML form from /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pw_std/Si.xml
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Pseudopotential format is: paw10
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basis_size (lnmax)= 4 (lmn_size= 8), orbitals= 0 0 1 1
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Spheres core radius: rc_sph= 1.90944987
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1 radial meshes are used:
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- mesh 1: r(i)=AA*[exp(BB*(i-1))-1], size=2001 , AA= 0.43309E-03 BB= 0.60633E-02
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Shapefunction is BESSEL type: shapef(r,l)=aa(1,l)*jl(q(1,l)*r)+aa(2,l)*jl(q(2,l)*r)
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Radius for shape functions = 1.60149249
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mmax= 2001
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Radial grid used for partial waves is grid 1
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Radial grid used for projectors is grid 1
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Radial grid used for (t)core density is grid 1
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Radial grid used for Vloc is grid 1
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Radial grid used for pseudo valence density is grid 1
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Mesh size for Vloc has been set to 1772 to avoid numerical noise.
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Compensation charge density is not taken into account in XC energy/potential
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pspatm: atomic psp has been read and splines computed
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3.52801429E+03 ecore*ucvol(ha*bohr**3)
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--------------------------------------------------------------------------------
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_setup2: Arith. and geom. avg. npw (full set) are 2330.375 2330.278
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================================================================================
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--- !BeginCycle
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iteration_state: {dtset: 1, }
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solver: {iscf: 17, nstep: 50, nline: 4, wfoptalg: 10, }
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tolerances: {tolvrs: 1.00E-08, }
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...
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iter Etot(hartree) deltaE(h) residm nres2
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ETOT 1 -60.084602018211 -6.008E+01 3.126E-02 6.552E+00
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ETOT 2 -60.161408195776 -7.681E-02 3.611E-03 1.120E+00
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ETOT 3 -60.147057385966 1.435E-02 6.789E-04 2.389E-02
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ETOT 4 -60.147230854265 -1.735E-04 1.241E-04 6.340E-03
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ETOT 5 -60.147237297166 -6.443E-06 7.216E-05 3.352E-04
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ETOT 6 -60.147231150204 6.147E-06 1.095E-04 5.428E-05
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ETOT 7 -60.147231225728 -7.552E-08 1.290E-04 2.212E-06
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ETOT 8 -60.147231262968 -3.724E-08 1.759E-04 7.896E-07
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ETOT 9 -60.147231255433 7.535E-09 1.133E-04 8.810E-08
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ETOT 10 -60.147231254157 1.276E-09 1.127E-04 9.697E-09
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At SCF step 10 nres2 = 9.70E-09 < tolvrs= 1.00E-08 =>converged.
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--- !ResultsGS
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iteration_state: {dtset: 1, }
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comment : Summary of ground state results
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lattice_vectors:
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- [ 0.0000000, 10.2612129, 10.2612129, ]
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- [ 10.2612129, 0.0000000, 10.2612129, ]
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- [ 10.2612129, 10.2612129, 0.0000000, ]
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lattice_lengths: [ 14.51155, 14.51155, 14.51155, ]
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lattice_angles: [ 60.000, 60.000, 60.000, ] # degrees, (23, 13, 12)
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lattice_volume: 2.1608573E+03
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convergence: {deltae: 1.276E-09, res2: 9.697E-09, residm: 1.127E-04, diffor: 0.000E+00, }
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etotal : -6.01472313E+01
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entropy : 0.00000000E+00
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fermie : 2.03044719E-01
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cartesian_stress_tensor: null
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pressure_GPa: null
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xred :
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- [ 0.0000E+00, 0.0000E+00, 0.0000E+00, Si]
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- [ -9.8857E-18, 9.8857E-18, 5.0000E-01, Si]
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- [ 9.8857E-18, 5.0000E-01, -9.8857E-18, Si]
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- [ 5.0000E-01, 9.8857E-18, -9.8857E-18, Si]
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- [ 9.8857E-18, 5.0000E-01, 5.0000E-01, Si]
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- [ 5.0000E-01, 9.8857E-18, 5.0000E-01, Si]
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- [ 5.0000E-01, 5.0000E-01, -1.9771E-17, Si]
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- [ 5.0000E-01, 5.0000E-01, 5.0000E-01, Si]
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- [ 1.2500E-01, 1.2500E-01, 1.2500E-01, Si]
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- [ 1.2500E-01, 1.2500E-01, 6.2500E-01, Si]
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- [ 1.2500E-01, 6.2500E-01, 1.2500E-01, Si]
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- [ 6.2500E-01, 1.2500E-01, 1.2500E-01, Si]
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- [ 1.2500E-01, 6.2500E-01, 6.2500E-01, Si]
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- [ 6.2500E-01, 1.2500E-01, 6.2500E-01, Si]
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- [ 6.2500E-01, 6.2500E-01, 1.2500E-01, Si]
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cartesian_forces: null
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force_length_stats: {min: null, max: null, mean: null, }
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...
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Integrated electronic density in atomic spheres:
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------------------------------------------------
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Atom Sphere_radius Integrated_density
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1 1.90945 1.56538244
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2 1.90945 1.56538244
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3 1.90945 1.56538244
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4 1.90945 1.56538244
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5 1.90945 1.49441295
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6 1.90945 1.49441295
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7 1.90945 1.49441295
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8 1.90945 1.49441295
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9 1.90945 1.57560893
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10 1.90945 1.56949943
|
|
11 1.90945 1.56949943
|
|
12 1.90945 1.56949943
|
|
13 1.90945 1.56949943
|
|
14 1.90945 1.56949943
|
|
15 1.90945 1.56949943
|
|
|
|
PAW TEST:
|
|
==== Compensation charge inside spheres ============
|
|
The following values must be close to each other ...
|
|
Compensation charge over spherical meshes = -1.557977773495632
|
|
Compensation charge over fine fft grid = -1.557998822267869
|
|
|
|
==== Results concerning PAW augmentation regions ====
|
|
|
|
Total pseudopotential strength Dij (hartree):
|
|
Atom # 1
|
|
0.47277 73.83628 -0.00000 -0.00000 -0.00000 0.00004 0.00004 0.00004
|
|
73.83628 ********* -0.00074 -0.00074 -0.00074 0.00694 0.00694 0.00694
|
|
-0.00000 -0.00074 0.13273 -0.00000 -0.00000 -1.07092 0.00001 0.00001
|
|
-0.00000 -0.00074 -0.00000 0.13273 -0.00000 0.00001 -1.07092 0.00001
|
|
-0.00000 -0.00074 -0.00000 -0.00000 0.13273 0.00001 0.00001 -1.07092
|
|
0.00004 0.00694 -1.07092 0.00001 0.00001 7.67482 -0.00011 -0.00011
|
|
0.00004 0.00694 0.00001 -1.07092 0.00001 -0.00011 7.67482 -0.00011
|
|
0.00004 0.00694 0.00001 0.00001 -1.07092 -0.00011 -0.00011 7.67482
|
|
pawio_print_ij: WARNING -
|
|
The matrix seems to have high value(s) !
|
|
( 1 components have a value greater than 100.0).
|
|
It can cause instabilities during SCF convergence.
|
|
Action: you should check your atomic dataset (psp file)
|
|
and look for "high" projector functions...
|
|
Atom # 15
|
|
0.47290 73.87273 0.00000 -0.00002 0.00000 0.00000 0.00009 0.00000
|
|
73.87273 ********* 0.00000 -0.00161 0.00000 0.00000 0.00806 0.00000
|
|
0.00000 0.00000 0.13272 0.00000 -0.00000 -1.07121 0.00000 -0.00003
|
|
-0.00002 -0.00161 0.00000 0.13271 0.00000 0.00000 -1.07113 0.00000
|
|
0.00000 0.00000 -0.00000 0.00000 0.13272 -0.00003 0.00000 -1.07121
|
|
0.00000 0.00000 -1.07121 0.00000 -0.00003 7.68054 0.00000 0.00046
|
|
0.00009 0.00806 0.00000 -1.07113 0.00000 0.00000 7.67966 0.00000
|
|
0.00000 0.00000 -0.00003 0.00000 -1.07121 0.00046 0.00000 7.68054
|
|
pawio_print_ij: WARNING -
|
|
The matrix seems to have high value(s) !
|
|
( 1 components have a value greater than 100.0).
|
|
It can cause instabilities during SCF convergence.
|
|
Action: you should check your atomic dataset (psp file)
|
|
and look for "high" projector functions...
|
|
|
|
|
|
Augmentation waves occupancies Rhoij:
|
|
Atom # 1
|
|
1.47844 0.00011 -0.00120 -0.00120 -0.00120 -0.00001 -0.00001 -0.00001
|
|
0.00011 0.00000 -0.00000 -0.00000 -0.00000 0.00000 0.00000 0.00000
|
|
-0.00120 -0.00000 1.15969 0.00329 0.00329 0.00812 0.00000 0.00000
|
|
-0.00120 -0.00000 0.00329 1.15969 0.00329 0.00000 0.00812 0.00000
|
|
-0.00120 -0.00000 0.00329 0.00329 1.15969 0.00000 0.00000 0.00812
|
|
-0.00001 0.00000 0.00812 0.00000 0.00000 0.00007 -0.00000 -0.00000
|
|
-0.00001 0.00000 0.00000 0.00812 0.00000 -0.00000 0.00007 -0.00000
|
|
-0.00001 0.00000 0.00000 0.00000 0.00812 -0.00000 -0.00000 0.00007
|
|
Atom # 15
|
|
1.47551 0.00011 0.00000 -0.01128 0.00000 0.00000 -0.00006 0.00000
|
|
0.00011 0.00000 0.00000 -0.00001 0.00000 0.00000 0.00000 0.00000
|
|
0.00000 0.00000 1.12603 0.00000 -0.05270 0.00794 0.00000 -0.00011
|
|
-0.01128 -0.00001 0.00000 1.19405 0.00000 0.00000 0.00812 0.00000
|
|
0.00000 0.00000 -0.05270 0.00000 1.12603 -0.00011 0.00000 0.00794
|
|
0.00000 0.00000 0.00794 0.00000 -0.00011 0.00007 0.00000 0.00000
|
|
-0.00006 0.00000 0.00000 0.00812 0.00000 0.00000 0.00007 0.00000
|
|
0.00000 0.00000 -0.00011 0.00000 0.00794 0.00000 0.00000 0.00007
|
|
|
|
|
|
================================================================================
|
|
|
|
----iterations are completed or convergence reached----
|
|
|
|
Mean square residual over all n,k,spin= 11.957E-07; max= 11.270E-05
|
|
reduced coordinates (array xred) for 15 atoms
|
|
0.000000000000 0.000000000000 0.000000000000
|
|
-0.000000000000 0.000000000000 0.500000000000
|
|
0.000000000000 0.500000000000 -0.000000000000
|
|
0.500000000000 0.000000000000 -0.000000000000
|
|
0.000000000000 0.500000000000 0.500000000000
|
|
0.500000000000 0.000000000000 0.500000000000
|
|
0.500000000000 0.500000000000 -0.000000000000
|
|
0.500000000000 0.500000000000 0.500000000000
|
|
0.125000000000 0.125000000000 0.125000000000
|
|
0.125000000000 0.125000000000 0.625000000000
|
|
0.125000000000 0.625000000000 0.125000000000
|
|
0.625000000000 0.125000000000 0.125000000000
|
|
0.125000000000 0.625000000000 0.625000000000
|
|
0.625000000000 0.125000000000 0.625000000000
|
|
0.625000000000 0.625000000000 0.125000000000
|
|
rms dE/dt= 0.0000E+00; max dE/dt= 0.0000E+00; dE/dt below (all hartree)
|
|
1 0.000000000000 0.000000000000 0.000000000000
|
|
2 0.000000000000 0.000000000000 0.000000000000
|
|
3 0.000000000000 0.000000000000 0.000000000000
|
|
4 0.000000000000 0.000000000000 0.000000000000
|
|
5 0.000000000000 0.000000000000 0.000000000000
|
|
6 0.000000000000 0.000000000000 0.000000000000
|
|
7 0.000000000000 0.000000000000 0.000000000000
|
|
8 0.000000000000 0.000000000000 0.000000000000
|
|
9 0.000000000000 0.000000000000 0.000000000000
|
|
10 0.000000000000 0.000000000000 0.000000000000
|
|
11 0.000000000000 0.000000000000 0.000000000000
|
|
12 0.000000000000 0.000000000000 0.000000000000
|
|
13 0.000000000000 0.000000000000 0.000000000000
|
|
14 0.000000000000 0.000000000000 0.000000000000
|
|
15 0.000000000000 0.000000000000 0.000000000000
|
|
|
|
cartesian coordinates (angstrom) at end:
|
|
1 0.00000000000000 0.00000000000000 0.00000000000000
|
|
2 2.71500000000000 2.71500000000000 -0.00000000000000
|
|
3 2.71500000000000 -0.00000000000000 2.71500000000000
|
|
4 -0.00000000000000 2.71500000000000 2.71500000000000
|
|
5 5.43000000000000 2.71500000000000 2.71500000000000
|
|
6 2.71500000000000 5.43000000000000 2.71500000000000
|
|
7 2.71500000000000 2.71500000000000 5.43000000000000
|
|
8 5.43000000000000 5.43000000000000 5.43000000000000
|
|
9 1.35750000000000 1.35750000000000 1.35750000000000
|
|
10 4.07250000000000 4.07250000000000 1.35750000000000
|
|
11 4.07250000000000 1.35750000000000 4.07250000000000
|
|
12 1.35750000000000 4.07250000000000 4.07250000000000
|
|
13 6.78750000000000 4.07250000000000 4.07250000000000
|
|
14 4.07250000000000 6.78750000000000 4.07250000000000
|
|
15 4.07250000000000 4.07250000000000 6.78750000000000
|
|
length scales= 10.261212901569 10.261212901569 10.261212901569 bohr
|
|
= 5.430000000000 5.430000000000 5.430000000000 angstroms
|
|
Fermi (or HOMO) energy (hartree) = 0.20304 Average Vxc (hartree)= -0.34707
|
|
Eigenvalues (hartree) for nkpt= 3 k points:
|
|
kpt# 1, nband= 36, wtk= 0.12500, kpt= 0.0000 0.0000 0.0000 (reduced coord)
|
|
-0.25972 -0.17989 -0.17989 -0.17989 -0.15798 -0.11500 -0.11500 -0.10946
|
|
-0.10946 -0.10946 -0.09155 -0.07330 -0.07330 -0.07330 0.04454 0.06803
|
|
0.06803 0.06803 0.08441 0.08441 0.08441 0.12893 0.12893 0.12893
|
|
0.12895 0.12895 0.15761 0.15761 0.15761 0.20304 0.20304 0.20304
|
|
0.20403 0.20490 0.20490 0.22897
|
|
prteigrs : prtvol=0 or 1, do not print more k-points.
|
|
|
|
|
|
--- !EnergyTerms
|
|
iteration_state : {dtset: 1, }
|
|
comment : Components of total free energy in Hartree
|
|
kinetic : 2.23432184067698E+01
|
|
hartree : 5.15956628174318E+00
|
|
xc : -3.56390095163746E+01
|
|
Ewald energy : -6.05835621191802E+01
|
|
psp_core : 1.63269192139636E+00
|
|
local_psp : -2.07370728544821E+01
|
|
spherical_terms : 2.76769233745481E+01
|
|
total_energy : -6.01472445055795E+01
|
|
total_energy_eV : -1.63668975836260E+03
|
|
...
|
|
|
|
|
|
--- !EnergyTermsDC
|
|
iteration_state : {dtset: 1, }
|
|
comment : '"Double-counting" decomposition of free energy'
|
|
band_energy : -5.76972468709001E-01
|
|
Ewald energy : -6.05835621191802E+01
|
|
psp_core : 1.63269192139636E+00
|
|
xc_dc : -1.50781158770500E+01
|
|
spherical_terms : 1.44587272893858E+01
|
|
total_energy_dc : -6.01472312541571E+01
|
|
total_energy_dc_eV : -1.63668939777306E+03
|
|
...
|
|
|
|
|
|
================================================================================
|
|
== DATASET 2 ==================================================================
|
|
- mpi_nproc: 1, omp_nthreads: -1 (-1 if OMP is not activated)
|
|
|
|
|
|
--- !DatasetInfo
|
|
iteration_state: {dtset: 2, }
|
|
dimensions: {natom: 15, nkpt: 1, mband: 36, nsppol: 1, nspinor: 1, nspden: 1, mpw: 1139, }
|
|
cutoff_energies: {ecut: 8.0, pawecutdg: 15.0, }
|
|
electrons: {nelect: 1.00000000E+00, charge: 0.00000000E+00, occopt: 1.00000000E+00, tsmear: 1.00000000E-02, }
|
|
meta: {optdriver: 0, ionmov: 0, optcell: 0, iscf: 17, paral_kgb: 0, }
|
|
...
|
|
|
|
mkfilename : getden/=0, take file _DEN from output of DATASET 1.
|
|
|
|
Real(R)+Recip(G) space primitive vectors, cartesian coordinates (Bohr,Bohr^-1):
|
|
R(1)= 0.0000000 10.2612129 10.2612129 G(1)= -0.0487272 0.0487272 0.0487272
|
|
R(2)= 10.2612129 0.0000000 10.2612129 G(2)= 0.0487272 -0.0487272 0.0487272
|
|
R(3)= 10.2612129 10.2612129 0.0000000 G(3)= 0.0487272 0.0487272 -0.0487272
|
|
Unit cell volume ucvol= 2.1608573E+03 bohr^3
|
|
Angles (23,13,12)= 6.00000000E+01 6.00000000E+01 6.00000000E+01 degrees
|
|
|
|
Coarse grid specifications (used for wave-functions):
|
|
|
|
getcut: wavevector= 0.0000 0.0000 0.0000 ngfft= 40 40 40
|
|
ecut(hartree)= 8.000 => boxcut(ratio)= 2.16489
|
|
|
|
Fine grid specifications (used for densities):
|
|
|
|
getcut: wavevector= 0.0000 0.0000 0.0000 ngfft= 54 54 54
|
|
ecut(hartree)= 15.000 => boxcut(ratio)= 2.13510
|
|
|
|
--- Pseudopotential description ------------------------------------------------
|
|
- pspini: atom type 1 psp file is /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pw_std/Si.xml
|
|
- pspatm: opening atomic psp file /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pw_std/Si.xml
|
|
- pspatm : Reading pseudopotential header in XML form from /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pw_std/Si.xml
|
|
Pseudopotential format is: paw10
|
|
basis_size (lnmax)= 4 (lmn_size= 8), orbitals= 0 0 1 1
|
|
Spheres core radius: rc_sph= 1.90944987
|
|
1 radial meshes are used:
|
|
- mesh 1: r(i)=AA*[exp(BB*(i-1))-1], size=2001 , AA= 0.43309E-03 BB= 0.60633E-02
|
|
Shapefunction is BESSEL type: shapef(r,l)=aa(1,l)*jl(q(1,l)*r)+aa(2,l)*jl(q(2,l)*r)
|
|
Radius for shape functions = 1.60149249
|
|
mmax= 2001
|
|
Radial grid used for partial waves is grid 1
|
|
Radial grid used for projectors is grid 1
|
|
Radial grid used for (t)core density is grid 1
|
|
Radial grid used for Vloc is grid 1
|
|
Radial grid used for pseudo valence density is grid 1
|
|
Mesh size for Vloc has been set to 1772 to avoid numerical noise.
|
|
Compensation charge density is not taken into account in XC energy/potential
|
|
pspatm: atomic psp has been read and splines computed
|
|
|
|
--------------------------------------------------------------------------------
|
|
|
|
_setup2: Arith. and geom. avg. npw (full set) are 2277.000 2277.000
|
|
|
|
================================================================================
|
|
|
|
--- !BeginCycle
|
|
iteration_state: {dtset: 2, }
|
|
solver: {iscf: 17, nstep: 50, nline: 4, wfoptalg: 10, }
|
|
tolerances: {tolvrs: 1.00E-08, }
|
|
...
|
|
|
|
iter Etot(hartree) deltaE(h) residm nres2
|
|
ETOT 1 -60.576932832260 -6.058E+01 6.811E-02 4.519E-02
|
|
ETOT 2 -60.578390066111 -1.457E-03 3.979E-03 2.584E-02
|
|
ETOT 3 -60.578404380987 -1.431E-05 2.561E-03 5.390E-03
|
|
ETOT 4 -60.578407121176 -2.740E-06 1.215E-03 2.352E-03
|
|
ETOT 5 -60.578407764872 -6.437E-07 1.263E-03 2.181E-04
|
|
ETOT 6 -60.578407923485 -1.586E-07 8.516E-04 1.620E-05
|
|
ETOT 7 -60.578407964763 -4.128E-08 8.539E-04 3.526E-06
|
|
ETOT 8 -60.578407975817 -1.105E-08 7.483E-04 6.403E-07
|
|
ETOT 9 -60.578407978813 -2.996E-09 7.917E-04 5.324E-08
|
|
ETOT 10 -60.578407979536 -7.233E-10 5.868E-04 1.325E-09
|
|
|
|
At SCF step 10 nres2 = 1.33E-09 < tolvrs= 1.00E-08 =>converged.
|
|
|
|
--- !ResultsGS
|
|
iteration_state: {dtset: 2, }
|
|
comment : Summary of ground state results
|
|
lattice_vectors:
|
|
- [ 0.0000000, 10.2612129, 10.2612129, ]
|
|
- [ 10.2612129, 0.0000000, 10.2612129, ]
|
|
- [ 10.2612129, 10.2612129, 0.0000000, ]
|
|
lattice_lengths: [ 14.51155, 14.51155, 14.51155, ]
|
|
lattice_angles: [ 60.000, 60.000, 60.000, ] # degrees, (23, 13, 12)
|
|
lattice_volume: 2.1608573E+03
|
|
convergence: {deltae: -7.233E-10, res2: 1.325E-09, residm: 5.868E-04, diffor: 0.000E+00, }
|
|
etotal : -6.05784080E+01
|
|
entropy : 0.00000000E+00
|
|
fermie : -4.31176721E-01
|
|
cartesian_stress_tensor: null
|
|
pressure_GPa: null
|
|
xred :
|
|
- [ 0.0000E+00, 0.0000E+00, 0.0000E+00, Si]
|
|
- [ -9.8857E-18, 9.8857E-18, 5.0000E-01, Si]
|
|
- [ 9.8857E-18, 5.0000E-01, -9.8857E-18, Si]
|
|
- [ 5.0000E-01, 9.8857E-18, -9.8857E-18, Si]
|
|
- [ 9.8857E-18, 5.0000E-01, 5.0000E-01, Si]
|
|
- [ 5.0000E-01, 9.8857E-18, 5.0000E-01, Si]
|
|
- [ 5.0000E-01, 5.0000E-01, -1.9771E-17, Si]
|
|
- [ 5.0000E-01, 5.0000E-01, 5.0000E-01, Si]
|
|
- [ 1.2500E-01, 1.2500E-01, 1.2500E-01, Si]
|
|
- [ 1.2500E-01, 1.2500E-01, 6.2500E-01, Si]
|
|
- [ 1.2500E-01, 6.2500E-01, 1.2500E-01, Si]
|
|
- [ 6.2500E-01, 1.2500E-01, 1.2500E-01, Si]
|
|
- [ 1.2500E-01, 6.2500E-01, 6.2500E-01, Si]
|
|
- [ 6.2500E-01, 1.2500E-01, 6.2500E-01, Si]
|
|
- [ 6.2500E-01, 6.2500E-01, 1.2500E-01, Si]
|
|
cartesian_forces: null
|
|
force_length_stats: {min: null, max: null, mean: null, }
|
|
...
|
|
|
|
Integrated electronic density in atomic spheres:
|
|
------------------------------------------------
|
|
Atom Sphere_radius Integrated_density
|
|
1 1.90945 0.00103739
|
|
2 1.90945 0.00103739
|
|
3 1.90945 0.00103739
|
|
4 1.90945 0.00103739
|
|
5 1.90945 0.00228163
|
|
6 1.90945 0.00228163
|
|
7 1.90945 0.00228163
|
|
8 1.90945 0.00228163
|
|
9 1.90945 0.00080436
|
|
10 1.90945 0.00116263
|
|
11 1.90945 0.00116263
|
|
12 1.90945 0.00116263
|
|
13 1.90945 0.00116263
|
|
14 1.90945 0.00116263
|
|
15 1.90945 0.00116263
|
|
|
|
PAW TEST:
|
|
==== Compensation charge inside spheres ============
|
|
The following values must be close to each other ...
|
|
Compensation charge over spherical meshes = -0.001661456771314
|
|
Compensation charge over fine fft grid = -0.001675575990837
|
|
|
|
==== Results concerning PAW augmentation regions ====
|
|
|
|
Total pseudopotential strength Dij (hartree):
|
|
-Note: these are the positronic Dij
|
|
Atom # 1
|
|
2.28352 267.32160 0.00000 0.00000 0.00000 -0.00002 -0.00002 -0.00002
|
|
267.32160 ********* 0.00036 0.00036 0.00036 -0.00342 -0.00342 -0.00342
|
|
0.00000 0.00036 1.10708 0.00000 0.00000 -7.71869 -0.00002 -0.00002
|
|
0.00000 0.00036 0.00000 1.10708 0.00000 -0.00002 -7.71869 -0.00002
|
|
0.00000 0.00036 0.00000 0.00000 1.10708 -0.00002 -0.00002 -7.71869
|
|
-0.00002 -0.00342 -7.71869 -0.00002 -0.00002 52.08096 0.00022 0.00022
|
|
-0.00002 -0.00342 -0.00002 -7.71869 -0.00002 0.00022 52.08096 0.00022
|
|
-0.00002 -0.00342 -0.00002 -0.00002 -7.71869 0.00022 0.00022 52.08096
|
|
Atom # 15
|
|
2.28336 267.28124 0.00000 -0.00001 0.00000 0.00000 0.00014 0.00000
|
|
267.28124 ********* 0.00000 -0.00240 0.00000 0.00000 0.02933 0.00000
|
|
0.00000 0.00000 1.10707 0.00000 -0.00002 -7.71824 0.00000 0.00023
|
|
-0.00001 -0.00240 0.00000 1.10711 0.00000 0.00000 -7.71856 0.00000
|
|
0.00000 0.00000 -0.00002 0.00000 1.10707 0.00023 0.00000 -7.71824
|
|
0.00000 0.00000 -7.71824 0.00000 0.00023 52.07376 0.00000 -0.00228
|
|
0.00014 0.02933 0.00000 -7.71856 0.00000 0.00000 52.07697 0.00000
|
|
0.00000 0.00000 0.00023 0.00000 -7.71824 -0.00228 0.00000 52.07376
|
|
|
|
|
|
Augmentation waves occupancies Rhoij:
|
|
-Note: these are the positronic Rhoij
|
|
Atom # 1
|
|
0.00817 -0.00006 -0.00018 -0.00018 -0.00018 -0.00002 -0.00002 -0.00002
|
|
-0.00006 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
-0.00018 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
-0.00018 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
-0.00018 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
-0.00002 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
-0.00002 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
-0.00002 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
Atom # 15
|
|
0.00892 -0.00007 0.00000 0.00052 0.00000 0.00000 0.00006 0.00000
|
|
-0.00007 0.00000 0.00000 -0.00000 0.00000 0.00000 -0.00000 0.00000
|
|
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
0.00052 -0.00000 0.00000 0.00003 0.00000 0.00000 0.00000 0.00000
|
|
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
0.00006 -0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
|
|
|
|
|
|
|
|
--------------------------------------------------------------------------------
|
|
Results for electron-positron annihilation:
|
|
|
|
2 computations of positron lifetime have been performed (with different enhancement factors).
|
|
|
|
########## Lifetime computation 1
|
|
|
|
# Zero-positron density limit of Arponen and Pajanne provided by Boronski & Nieminen
|
|
Ref.: Boronski and R.M. Nieminen, Phys. Rev. B 34, 3820 (1986)
|
|
# Enhancement factor of Boronski & Nieminen
|
|
Ref.: Boronski and R.M. Nieminen, Phys. Rev. B 34, 3820 (1986)
|
|
|
|
Positron lifetime (ps) = 2.68899998E+02
|
|
Positron lifetime with IPM for core elec. (ps) = 2.71695232E+02
|
|
Annihilation rate (ns-1) = 3.71885463E+00
|
|
Annihilation rate with IPM for core elec. (ns-1) = 3.68059459E+00
|
|
|
|
Annihilation rate core/valence decomposition:
|
|
Core contribution to ann.rate (ns-1) = 1.58955337E-01
|
|
Valence contribution to ann.rate (ns-1) = 3.55989929E+00
|
|
Core contribution to ann.rate with IPM (ns-1) = 1.15122258E-01
|
|
Valence contribution to ann.rate with IPM (ns-1) = 3.56547233E+00
|
|
|
|
Annihilation rate PAW decomposition:
|
|
Plane-wave contribution to ann.rate (ns-1) = 3.68186803E+00
|
|
Plane-wave valence contribution to ann.rate (ns-1) = 3.56660625E+00
|
|
On-site core contribution to ann.rate (ns-1) = 4.36935524E-02
|
|
On-site valence contribution to ann.rate (ns-1) = -6.70696162E-03
|
|
Plane-wave contribution to ann.rate with IPM (ns-1) = 3.63165894E+00
|
|
Plane-wave core contrb. to ann.rate with IPM (ns-1) = 5.45846052E-02
|
|
|
|
########## Lifetime computation 2
|
|
|
|
# Zero-positron density limit of Arponen and Pajanne provided by Boronski & Nieminen
|
|
Ref.: Boronski and R.M. Nieminen, Phys. Rev. B 34, 3820 (1986)
|
|
# Enhancement factor of Boronski & Nieminen IN THE RPA LIMIT
|
|
Ref.: Boronski and R.M. Nieminen, Phys. Rev. B 34, 3820 (1986)
|
|
|
|
Positron lifetime (ps) = 2.46923233E+02
|
|
Positron lifetime with IPM for core elec. (ps) = 2.49277521E+02
|
|
Annihilation rate (ns-1) = 4.04984168E+00
|
|
Annihilation rate with IPM for core elec. (ns-1) = 4.01159316E+00
|
|
|
|
Annihilation rate core/valence decomposition:
|
|
Core contribution to ann.rate (ns-1) = 1.58918708E-01
|
|
Valence contribution to ann.rate (ns-1) = 3.89092297E+00
|
|
Core contribution to ann.rate with IPM (ns-1) = 1.15122258E-01
|
|
Valence contribution to ann.rate with IPM (ns-1) = 3.89647091E+00
|
|
|
|
Annihilation rate PAW decomposition:
|
|
Plane-wave contribution to ann.rate (ns-1) = 4.01286347E+00
|
|
Plane-wave valence contribution to ann.rate (ns-1) = 3.89762988E+00
|
|
On-site core contribution to ann.rate (ns-1) = 4.36851214E-02
|
|
On-site valence contribution to ann.rate (ns-1) = -6.70691261E-03
|
|
Plane-wave contribution to ann.rate with IPM (ns-1) = 3.96266437E+00
|
|
Plane-wave core contrb. to ann.rate with IPM (ns-1) = 5.45846052E-02
|
|
|
|
(*) IPM=Independent particle Model
|
|
|
|
================================================================================
|
|
|
|
----iterations are completed or convergence reached----
|
|
|
|
Mean square residual over all n,k,spin= 38.252E-06; max= 58.684E-05
|
|
reduced coordinates (array xred) for 15 atoms
|
|
0.000000000000 0.000000000000 0.000000000000
|
|
-0.000000000000 0.000000000000 0.500000000000
|
|
0.000000000000 0.500000000000 -0.000000000000
|
|
0.500000000000 0.000000000000 -0.000000000000
|
|
0.000000000000 0.500000000000 0.500000000000
|
|
0.500000000000 0.000000000000 0.500000000000
|
|
0.500000000000 0.500000000000 -0.000000000000
|
|
0.500000000000 0.500000000000 0.500000000000
|
|
0.125000000000 0.125000000000 0.125000000000
|
|
0.125000000000 0.125000000000 0.625000000000
|
|
0.125000000000 0.625000000000 0.125000000000
|
|
0.625000000000 0.125000000000 0.125000000000
|
|
0.125000000000 0.625000000000 0.625000000000
|
|
0.625000000000 0.125000000000 0.625000000000
|
|
0.625000000000 0.625000000000 0.125000000000
|
|
rms dE/dt= 0.0000E+00; max dE/dt= 0.0000E+00; dE/dt below (all hartree)
|
|
1 0.000000000000 0.000000000000 0.000000000000
|
|
2 0.000000000000 0.000000000000 0.000000000000
|
|
3 0.000000000000 0.000000000000 0.000000000000
|
|
4 0.000000000000 0.000000000000 0.000000000000
|
|
5 0.000000000000 0.000000000000 0.000000000000
|
|
6 0.000000000000 0.000000000000 0.000000000000
|
|
7 0.000000000000 0.000000000000 0.000000000000
|
|
8 0.000000000000 0.000000000000 0.000000000000
|
|
9 0.000000000000 0.000000000000 0.000000000000
|
|
10 0.000000000000 0.000000000000 0.000000000000
|
|
11 0.000000000000 0.000000000000 0.000000000000
|
|
12 0.000000000000 0.000000000000 0.000000000000
|
|
13 0.000000000000 0.000000000000 0.000000000000
|
|
14 0.000000000000 0.000000000000 0.000000000000
|
|
15 0.000000000000 0.000000000000 0.000000000000
|
|
|
|
cartesian coordinates (angstrom) at end:
|
|
1 0.00000000000000 0.00000000000000 0.00000000000000
|
|
2 2.71500000000000 2.71500000000000 -0.00000000000000
|
|
3 2.71500000000000 -0.00000000000000 2.71500000000000
|
|
4 -0.00000000000000 2.71500000000000 2.71500000000000
|
|
5 5.43000000000000 2.71500000000000 2.71500000000000
|
|
6 2.71500000000000 5.43000000000000 2.71500000000000
|
|
7 2.71500000000000 2.71500000000000 5.43000000000000
|
|
8 5.43000000000000 5.43000000000000 5.43000000000000
|
|
9 1.35750000000000 1.35750000000000 1.35750000000000
|
|
10 4.07250000000000 4.07250000000000 1.35750000000000
|
|
11 4.07250000000000 1.35750000000000 4.07250000000000
|
|
12 1.35750000000000 4.07250000000000 4.07250000000000
|
|
13 6.78750000000000 4.07250000000000 4.07250000000000
|
|
14 4.07250000000000 6.78750000000000 4.07250000000000
|
|
15 4.07250000000000 4.07250000000000 6.78750000000000
|
|
length scales= 10.261212901569 10.261212901569 10.261212901569 bohr
|
|
= 5.430000000000 5.430000000000 5.430000000000 angstroms
|
|
Fermi (or HOMO) energy (hartree) = -0.43118 Average Vxc (hartree)= -0.31513
|
|
Eigenvalues (hartree) for nkpt= 1 k points:
|
|
kpt# 1, nband= 36, wtk= 1.00000, kpt= 0.0000 0.0000 0.0000 (reduced coord)
|
|
-0.43118 -0.34563 -0.33626 -0.33626 -0.33626 -0.29469 -0.26723 -0.26723
|
|
-0.26723 -0.25982 -0.25982 -0.24703 -0.20546 -0.20546 -0.20546 -0.07983
|
|
-0.06427 -0.06427 -0.06427 -0.03294 -0.03294 -0.03294 0.01690 0.01690
|
|
0.01690 0.01737 0.01737 0.02736 0.02736 0.02736 0.08188 0.08294
|
|
0.08415 0.09458 0.09576 0.09971
|
|
|
|
--- !EnergyTerms
|
|
iteration_state : {dtset: 2, }
|
|
comment : Components of total free energy in Hartree
|
|
kinetic : 1.11932176576050E-01
|
|
local_psp : -5.49848386881383E-01
|
|
spherical_terms : -7.72686718332659E-03
|
|
positronic : -4.45643077488660E-01
|
|
electronic : -6.01472312541571E+01
|
|
electron_positron_interaction: 1.45172301507361E-02
|
|
total_energy : -6.05783571014950E+01
|
|
total_energy_eV : -1.64842092869694E+03
|
|
...
|
|
|
|
|
|
--- !EnergyTermsDC
|
|
iteration_state : {dtset: 2, }
|
|
comment : '"Double-counting" decomposition of free energy'
|
|
band_energy : -4.31176720711844E-01
|
|
spherical_terms : 0.00000000000000E+00
|
|
electron_positron_dc: -1.45172348180143E-02
|
|
positronic : -4.45693955529861E-01
|
|
electronic : -6.01472312541571E+01
|
|
electron_positron_interaction: 1.45172301507361E-02
|
|
total_energy_dc : -6.05784079795362E+01
|
|
total_energy_dc_eV : -1.64842231315885E+03
|
|
...
|
|
|
|
|
|
== END DATASET(S) ==============================================================
|
|
================================================================================
|
|
|
|
-outvars: echo values of variables after computation --------
|
|
acell 1.0261212902E+01 1.0261212902E+01 1.0261212902E+01 Bohr
|
|
amu 2.80855000E+01
|
|
chkprim 0
|
|
ecut 8.00000000E+00 Hartree
|
|
etotal1 -6.0147231254E+01
|
|
etotal2 -6.0578407980E+01
|
|
fcart1 9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
fcart2 9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
- fftalg 512
|
|
getden1 0
|
|
getden2 1
|
|
istwfk1 2 3 7
|
|
istwfk2 2
|
|
ixc -1012
|
|
jdtset 1 2
|
|
kpt1 0.00000000E+00 0.00000000E+00 0.00000000E+00
|
|
5.00000000E-01 0.00000000E+00 0.00000000E+00
|
|
5.00000000E-01 5.00000000E-01 0.00000000E+00
|
|
kpt2 0.00000000E+00 0.00000000E+00 0.00000000E+00
|
|
kptopt1 1
|
|
kptopt2 0
|
|
kptrlatt 2 0 0 0 2 0 0 0 2
|
|
kptrlen1 2.90230929E+01
|
|
kptrlen2 3.00000000E+01
|
|
P mkmem1 3
|
|
P mkmem2 1
|
|
natom 15
|
|
nband1 36
|
|
nband2 36
|
|
ndtset 2
|
|
ngfft 40 40 40
|
|
ngfftdg 54 54 54
|
|
nkpt1 3
|
|
nkpt2 1
|
|
nstep 50
|
|
nsym 24
|
|
ntypat 1
|
|
occ1 2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
|
|
2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
|
|
2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
|
|
2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
|
|
2.000000 2.000000 2.000000 2.000000 2.000000 2.000000
|
|
0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
|
|
occ2 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000
|
|
0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
|
|
0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
|
|
0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
|
|
0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
|
|
0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
|
|
optforces 0
|
|
optstress 0
|
|
pawecutdg 1.50000000E+01 Hartree
|
|
positron1 0
|
|
positron2 1
|
|
prteig 0
|
|
prtwf 0
|
|
rprim 0.0000000000E+00 1.0000000000E+00 1.0000000000E+00
|
|
1.0000000000E+00 0.0000000000E+00 1.0000000000E+00
|
|
1.0000000000E+00 1.0000000000E+00 0.0000000000E+00
|
|
shiftk1 0.00000000E+00 0.00000000E+00 0.00000000E+00
|
|
shiftk2 5.00000000E-01 5.00000000E-01 5.00000000E-01
|
|
spgroup 216
|
|
strten1 9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
strten2 9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
9.9999999999E+99 9.9999999999E+99 9.9999999999E+99
|
|
symrel 1 0 0 0 1 0 0 0 1 0 -1 1 0 -1 0 1 -1 0
|
|
-1 0 0 -1 0 1 -1 1 0 0 1 -1 1 0 -1 0 0 -1
|
|
-1 0 0 -1 1 0 -1 0 1 0 -1 1 1 -1 0 0 -1 0
|
|
1 0 0 0 0 1 0 1 0 0 1 -1 0 0 -1 1 0 -1
|
|
-1 0 1 -1 1 0 -1 0 0 0 -1 0 1 -1 0 0 -1 1
|
|
1 0 -1 0 0 -1 0 1 -1 0 1 0 0 0 1 1 0 0
|
|
1 0 -1 0 1 -1 0 0 -1 0 -1 0 0 -1 1 1 -1 0
|
|
-1 0 1 -1 0 0 -1 1 0 0 1 0 1 0 0 0 0 1
|
|
0 0 -1 0 1 -1 1 0 -1 1 -1 0 0 -1 1 0 -1 0
|
|
0 0 1 1 0 0 0 1 0 -1 1 0 -1 0 0 -1 0 1
|
|
0 0 1 0 1 0 1 0 0 1 -1 0 0 -1 0 0 -1 1
|
|
0 0 -1 1 0 -1 0 1 -1 -1 1 0 -1 0 1 -1 0 0
|
|
tnons 0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 -0.0000000
|
|
0.5000000 0.0000000 -0.0000000 -0.0000000 0.0000000 0.5000000
|
|
0.5000000 0.0000000 -0.0000000 0.0000000 0.5000000 -0.0000000
|
|
0.0000000 0.0000000 0.0000000 -0.0000000 0.0000000 0.5000000
|
|
0.5000000 0.0000000 -0.0000000 0.0000000 0.5000000 -0.0000000
|
|
-0.0000000 0.0000000 0.5000000 0.0000000 0.0000000 0.0000000
|
|
-0.0000000 0.0000000 0.5000000 0.0000000 0.5000000 -0.0000000
|
|
0.5000000 0.0000000 -0.0000000 0.0000000 0.0000000 0.0000000
|
|
-0.0000000 0.0000000 0.5000000 0.0000000 0.5000000 -0.0000000
|
|
0.0000000 0.0000000 0.0000000 0.5000000 0.0000000 -0.0000000
|
|
0.0000000 0.0000000 0.0000000 0.0000000 0.5000000 -0.0000000
|
|
-0.0000000 0.0000000 0.5000000 0.5000000 0.0000000 -0.0000000
|
|
tolvrs 1.00000000E-08
|
|
typat 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
useylm 1
|
|
wtk1 0.12500 0.50000 0.37500
|
|
wtk2 1.00000
|
|
xangst 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
|
|
2.7150000000E+00 2.7150000000E+00 -2.4293545990E-33
|
|
2.7150000000E+00 -2.4293545990E-33 2.7150000000E+00
|
|
-2.4293545990E-33 2.7150000000E+00 2.7150000000E+00
|
|
5.4300000000E+00 2.7150000000E+00 2.7150000000E+00
|
|
2.7150000000E+00 5.4300000000E+00 2.7150000000E+00
|
|
2.7150000000E+00 2.7150000000E+00 5.4300000000E+00
|
|
5.4300000000E+00 5.4300000000E+00 5.4300000000E+00
|
|
1.3575000000E+00 1.3575000000E+00 1.3575000000E+00
|
|
4.0725000000E+00 4.0725000000E+00 1.3575000000E+00
|
|
4.0725000000E+00 1.3575000000E+00 4.0725000000E+00
|
|
1.3575000000E+00 4.0725000000E+00 4.0725000000E+00
|
|
6.7875000000E+00 4.0725000000E+00 4.0725000000E+00
|
|
4.0725000000E+00 6.7875000000E+00 4.0725000000E+00
|
|
4.0725000000E+00 4.0725000000E+00 6.7875000000E+00
|
|
xcart 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
|
|
5.1306064508E+00 5.1306064508E+00 -4.5908148717E-33
|
|
5.1306064508E+00 -4.5908148717E-33 5.1306064508E+00
|
|
-4.5908148717E-33 5.1306064508E+00 5.1306064508E+00
|
|
1.0261212902E+01 5.1306064508E+00 5.1306064508E+00
|
|
5.1306064508E+00 1.0261212902E+01 5.1306064508E+00
|
|
5.1306064508E+00 5.1306064508E+00 1.0261212902E+01
|
|
1.0261212902E+01 1.0261212902E+01 1.0261212902E+01
|
|
2.5653032254E+00 2.5653032254E+00 2.5653032254E+00
|
|
7.6959096762E+00 7.6959096762E+00 2.5653032254E+00
|
|
7.6959096762E+00 2.5653032254E+00 7.6959096762E+00
|
|
2.5653032254E+00 7.6959096762E+00 7.6959096762E+00
|
|
1.2826516127E+01 7.6959096762E+00 7.6959096762E+00
|
|
7.6959096762E+00 1.2826516127E+01 7.6959096762E+00
|
|
7.6959096762E+00 7.6959096762E+00 1.2826516127E+01
|
|
xred 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
|
|
-9.8857149303E-18 9.8857149303E-18 5.0000000000E-01
|
|
9.8857149303E-18 5.0000000000E-01 -9.8857149303E-18
|
|
5.0000000000E-01 9.8857149303E-18 -9.8857149303E-18
|
|
9.8857149303E-18 5.0000000000E-01 5.0000000000E-01
|
|
5.0000000000E-01 9.8857149303E-18 5.0000000000E-01
|
|
5.0000000000E-01 5.0000000000E-01 -1.9771429861E-17
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5.0000000000E-01 5.0000000000E-01 5.0000000000E-01
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1.2500000000E-01 1.2500000000E-01 1.2500000000E-01
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1.2500000000E-01 1.2500000000E-01 6.2500000000E-01
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1.2500000000E-01 6.2500000000E-01 1.2500000000E-01
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6.2500000000E-01 1.2500000000E-01 1.2500000000E-01
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|
1.2500000000E-01 6.2500000000E-01 6.2500000000E-01
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6.2500000000E-01 1.2500000000E-01 6.2500000000E-01
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6.2500000000E-01 6.2500000000E-01 1.2500000000E-01
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znucl 14.00000
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================================================================================
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- Timing analysis has been suppressed with timopt=0
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================================================================================
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Suggested references for the acknowledgment of ABINIT usage.
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The users of ABINIT have little formal obligations with respect to the ABINIT group
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(those specified in the GNU General Public License, http://www.gnu.org/copyleft/gpl.txt).
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However, it is common practice in the scientific literature,
|
|
to acknowledge the efforts of people that have made the research possible.
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In this spirit, please find below suggested citations of work written by ABINIT developers,
|
|
corresponding to implementations inside of ABINIT that you have used in the present run.
|
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Note also that it will be of great value to readers of publications presenting these results,
|
|
to read papers enabling them to understand the theoretical formalism and details
|
|
of the ABINIT implementation.
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For information on why they are suggested, see also https://docs.abinit.org/theory/acknowledgments.
|
|
-
|
|
- [1] Two-component density functional theory within the projector augmented-wave approach:
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|
- Accurate and self-consistent computations of positron lifetimes and momentum distributions
|
|
- J. Wiktor, G. Jomard and M. Torrent, Phys. Rev. B 92, 125113 (2015).
|
|
- Comment: to be cited in case the computation of electron-positron annihilation properties within the 2-component DFT, i.e. positron/=0.
|
|
- Strong suggestion to cite this paper.
|
|
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#wiktor2015
|
|
-
|
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- [2] Implementation of the Projector Augmented-Wave Method in the ABINIT code.
|
|
- M. Torrent, F. Jollet, F. Bottin, G. Zerah, and X. Gonze Comput. Mat. Science 42, 337, (2008).
|
|
- Comment: PAW calculations. Strong suggestion to cite this paper.
|
|
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#torrent2008
|
|
-
|
|
- [3] Libxc: A library of exchange and correlation functionals for density functional theory.
|
|
- M.A.L. Marques, M.J.T. Oliveira, T. Burnus, Computer Physics Communications 183, 2227 (2012).
|
|
- Comment: to be cited when LibXC is used (negative value of ixc)
|
|
- Strong suggestion to cite this paper.
|
|
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#marques2012
|
|
-
|
|
- [4] The Abinit project: Impact, environment and recent developments.
|
|
- Computer Phys. Comm. 248, 107042 (2020).
|
|
- X.Gonze, B. Amadon, G. Antonius, F.Arnardi, L.Baguet, J.-M.Beuken,
|
|
- J.Bieder, F.Bottin, J.Bouchet, E.Bousquet, N.Brouwer, F.Bruneval,
|
|
- G.Brunin, T.Cavignac, J.-B. Charraud, Wei Chen, M.Cote, S.Cottenier,
|
|
- J.Denier, G.Geneste, Ph.Ghosez, M.Giantomassi, Y.Gillet, O.Gingras,
|
|
- D.R.Hamann, G.Hautier, Xu He, N.Helbig, N.Holzwarth, Y.Jia, F.Jollet,
|
|
- W.Lafargue-Dit-Hauret, K.Lejaeghere, M.A.L.Marques, A.Martin, C.Martins,
|
|
- H.P.C. Miranda, F.Naccarato, K. Persson, G.Petretto, V.Planes, Y.Pouillon,
|
|
- S.Prokhorenko, F.Ricci, G.-M.Rignanese, A.H.Romero, M.M.Schmitt, M.Torrent,
|
|
- M.J.van Setten, B.Van Troeye, M.J.Verstraete, G.Zerah and J.W.Zwanzig
|
|
- Comment: the fifth generic paper describing the ABINIT project.
|
|
- Note that a version of this paper, that is not formatted for Computer Phys. Comm.
|
|
- is available at https://www.abinit.org/sites/default/files/ABINIT20.pdf .
|
|
- The licence allows the authors to put it on the Web.
|
|
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#gonze2020
|
|
-
|
|
- [5] ABINIT: Overview, and focus on selected capabilities
|
|
- J. Chem. Phys. 152, 124102 (2020).
|
|
- A. Romero, D.C. Allan, B. Amadon, G. Antonius, T. Applencourt, L.Baguet,
|
|
- J.Bieder, F.Bottin, J.Bouchet, E.Bousquet, F.Bruneval,
|
|
- G.Brunin, D.Caliste, M.Cote,
|
|
- J.Denier, C. Dreyer, Ph.Ghosez, M.Giantomassi, Y.Gillet, O.Gingras,
|
|
- D.R.Hamann, G.Hautier, F.Jollet, G. Jomard,
|
|
- A.Martin,
|
|
- H.P.C. Miranda, F.Naccarato, G.Petretto, N.A. Pike, V.Planes,
|
|
- S.Prokhorenko, T. Rangel, F.Ricci, G.-M.Rignanese, M.Royo, M.Stengel, M.Torrent,
|
|
- M.J.van Setten, B.Van Troeye, M.J.Verstraete, J.Wiktor, J.W.Zwanziger, and X.Gonze.
|
|
- Comment: a global overview of ABINIT, with focus on selected capabilities .
|
|
- Note that a version of this paper, that is not formatted for J. Chem. Phys
|
|
- is available at https://www.abinit.org/sites/default/files/ABINIT20_JPC.pdf .
|
|
- The licence allows the authors to put it on the Web.
|
|
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#romero2020
|
|
-
|
|
- [6] Recent developments in the ABINIT software package.
|
|
- Computer Phys. Comm. 205, 106 (2016).
|
|
- X.Gonze, F.Jollet, F.Abreu Araujo, D.Adams, B.Amadon, T.Applencourt,
|
|
- C.Audouze, J.-M.Beuken, J.Bieder, A.Bokhanchuk, E.Bousquet, F.Bruneval
|
|
- D.Caliste, M.Cote, F.Dahm, F.Da Pieve, M.Delaveau, M.Di Gennaro,
|
|
- B.Dorado, C.Espejo, G.Geneste, L.Genovese, A.Gerossier, M.Giantomassi,
|
|
- Y.Gillet, D.R.Hamann, L.He, G.Jomard, J.Laflamme Janssen, S.Le Roux,
|
|
- A.Levitt, A.Lherbier, F.Liu, I.Lukacevic, A.Martin, C.Martins,
|
|
- M.J.T.Oliveira, S.Ponce, Y.Pouillon, T.Rangel, G.-M.Rignanese,
|
|
- A.H.Romero, B.Rousseau, O.Rubel, A.A.Shukri, M.Stankovski, M.Torrent,
|
|
- M.J.Van Setten, B.Van Troeye, M.J.Verstraete, D.Waroquier, J.Wiktor,
|
|
- B.Xu, A.Zhou, J.W.Zwanziger.
|
|
- Comment: the fourth generic paper describing the ABINIT project.
|
|
- Note that a version of this paper, that is not formatted for Computer Phys. Comm.
|
|
- is available at https://www.abinit.org/sites/default/files/ABINIT16.pdf .
|
|
- The licence allows the authors to put it on the Web.
|
|
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#gonze2016
|
|
-
|
|
- Proc. 0 individual time (sec): cpu= 12.0 wall= 12.6
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|
================================================================================
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Calculation completed.
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.Delivered 44 WARNINGs and 6 COMMENTs to log file.
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+Overall time at end (sec) : cpu= 12.0 wall= 12.6
|