abinit/tests/tutorial/Refs/tnuc_3.abo

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.Version 10.1.4.5 of ABINIT, released Sep 2024.
.(MPI version, prepared for a x86_64_linux_gnu13.2 computer)
.Copyright (C) 1998-2025 ABINIT group .
ABINIT comes with ABSOLUTELY NO WARRANTY.
It is free software, and you are welcome to redistribute it
under certain conditions (GNU General Public License,
see ~abinit/COPYING or http://www.gnu.org/copyleft/gpl.txt).
ABINIT is a project of the Universite Catholique de Louvain,
Corning Inc. and other collaborators, see ~abinit/doc/developers/contributors.txt .
Please read https://docs.abinit.org/theory/acknowledgments for suggested
acknowledgments of the ABINIT effort.
For more information, see https://www.abinit.org .
.Starting date : Fri 13 Sep 2024.
- ( at 19h06 )
- input file -> /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/TestBot_MPI1/tutorial_tnuc_3/tnuc_3.abi
- output file -> tnuc_3.abo
- root for input files -> tnuc_3i
- root for output files -> tnuc_3o
- inpspheads : Reading pseudopotential header in XML form from
- /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pbe_std/Sn-sp.xml
Symmetries : space group Fd -3 m (#227); Bravais cF (face-center cubic)
================================================================================
Values of the parameters that define the memory need of the present run
intxc = 0 ionmov = 0 iscf = 17 lmnmax = 13
lnmax = 5 mgfft = 32 mpssoang = 3 mqgrid = 3001
natom = 2 nloc_mem = 2 nspden = 1 nspinor = 1
nsppol = 1 nsym = 48 n1xccc = 1 ntypat = 1
occopt = 1 xclevel = 2
- mband = 5 mffmem = 1 mkmem = 10
mpw = 1292 nfft = 32768 nkpt = 10
PAW method is used; the additional fine FFT grid is defined by:
mgfftf= 36 nfftf = 46656
================================================================================
P This job should need less than 20.915 Mbytes of memory.
Rough estimation (10% accuracy) of disk space for files :
_ WF disk file : 0.988 Mbytes ; DEN or POT disk file : 0.358 Mbytes.
================================================================================
--------------------------------------------------------------------------------
------------- Echo of variables that govern the present computation ------------
--------------------------------------------------------------------------------
-
- outvars: echo of selected default values
- iomode0 = 0 , fftalg0 =512 , wfoptalg0 = 10
-
- outvars: echo of global parameters not present in the input file
- max_nthreads = 0
-
-outvars: echo values of preprocessed input variables --------
acell 1.2262810608E+01 1.2262810608E+01 1.2262810608E+01 Bohr
amu 1.18710000E+02
ecut 1.50000000E+01 Hartree
- fftalg 512
ixc -101130
kpt -1.25000000E-01 -2.50000000E-01 0.00000000E+00
-1.25000000E-01 5.00000000E-01 0.00000000E+00
-2.50000000E-01 -3.75000000E-01 0.00000000E+00
-1.25000000E-01 -3.75000000E-01 1.25000000E-01
-1.25000000E-01 2.50000000E-01 0.00000000E+00
-2.50000000E-01 3.75000000E-01 0.00000000E+00
-3.75000000E-01 5.00000000E-01 0.00000000E+00
-2.50000000E-01 5.00000000E-01 1.25000000E-01
-1.25000000E-01 0.00000000E+00 0.00000000E+00
-3.75000000E-01 0.00000000E+00 0.00000000E+00
kptrlatt 4 -4 4 -4 4 4 -4 -4 4
kptrlen 4.90512424E+01
P mkmem 10
natom 2
nband 5
ngfft 32 32 32
ngfftdg 36 36 36
nkpt 10
nstep 10
nsym 48
ntypat 1
nucfc 1
occ 2.000000 2.000000 2.000000 2.000000 0.000000
pawecutdg 2.00000000E+01 Hartree
prtden 0
prteig 0
prtwf 0
rprim 0.0000000000E+00 5.0000000000E-01 5.0000000000E-01
5.0000000000E-01 0.0000000000E+00 5.0000000000E-01
5.0000000000E-01 5.0000000000E-01 0.0000000000E+00
shiftk 5.00000000E-01 5.00000000E-01 5.00000000E-01
spgroup 227
symrel 1 0 0 0 1 0 0 0 1 -1 0 0 0 -1 0 0 0 -1
0 -1 1 0 -1 0 1 -1 0 0 1 -1 0 1 0 -1 1 0
-1 0 0 -1 0 1 -1 1 0 1 0 0 1 0 -1 1 -1 0
0 1 -1 1 0 -1 0 0 -1 0 -1 1 -1 0 1 0 0 1
-1 0 0 -1 1 0 -1 0 1 1 0 0 1 -1 0 1 0 -1
0 -1 1 1 -1 0 0 -1 0 0 1 -1 -1 1 0 0 1 0
1 0 0 0 0 1 0 1 0 -1 0 0 0 0 -1 0 -1 0
0 1 -1 0 0 -1 1 0 -1 0 -1 1 0 0 1 -1 0 1
-1 0 1 -1 1 0 -1 0 0 1 0 -1 1 -1 0 1 0 0
0 -1 0 1 -1 0 0 -1 1 0 1 0 -1 1 0 0 1 -1
1 0 -1 0 0 -1 0 1 -1 -1 0 1 0 0 1 0 -1 1
0 1 0 0 0 1 1 0 0 0 -1 0 0 0 -1 -1 0 0
1 0 -1 0 1 -1 0 0 -1 -1 0 1 0 -1 1 0 0 1
0 -1 0 0 -1 1 1 -1 0 0 1 0 0 1 -1 -1 1 0
-1 0 1 -1 0 0 -1 1 0 1 0 -1 1 0 0 1 -1 0
0 1 0 1 0 0 0 0 1 0 -1 0 -1 0 0 0 0 -1
0 0 -1 0 1 -1 1 0 -1 0 0 1 0 -1 1 -1 0 1
1 -1 0 0 -1 1 0 -1 0 -1 1 0 0 1 -1 0 1 0
0 0 1 1 0 0 0 1 0 0 0 -1 -1 0 0 0 -1 0
-1 1 0 -1 0 0 -1 0 1 1 -1 0 1 0 0 1 0 -1
0 0 1 0 1 0 1 0 0 0 0 -1 0 -1 0 -1 0 0
1 -1 0 0 -1 0 0 -1 1 -1 1 0 0 1 0 0 1 -1
0 0 -1 1 0 -1 0 1 -1 0 0 1 -1 0 1 0 -1 1
-1 1 0 -1 0 1 -1 0 0 1 -1 0 1 0 -1 1 0 0
tnons 0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
tolvrs 1.00000000E-18
typat 1 1
useylm 1
wtk 0.09375 0.09375 0.09375 0.18750 0.09375 0.09375
0.09375 0.18750 0.03125 0.03125
xangst 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
1.6222999718E+00 1.6222999718E+00 1.6222999718E+00
xcart 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
3.0657026520E+00 3.0657026520E+00 3.0657026520E+00
xred 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
2.5000000000E-01 2.5000000000E-01 2.5000000000E-01
znucl 50.00000
================================================================================
chkinp: Checking input parameters for consistency.
================================================================================
== DATASET 1 ==================================================================
- mpi_nproc: 1, omp_nthreads: -1 (-1 if OMP is not activated)
--- !DatasetInfo
iteration_state: {dtset: 1, }
dimensions: {natom: 2, nkpt: 10, mband: 5, nsppol: 1, nspinor: 1, nspden: 1, mpw: 1292, }
cutoff_energies: {ecut: 15.0, pawecutdg: 20.0, }
electrons: {nelect: 8.00000000E+00, charge: 0.00000000E+00, occopt: 1.00000000E+00, tsmear: 1.00000000E-02, }
meta: {optdriver: 0, ionmov: 0, optcell: 0, iscf: 17, paral_kgb: 0, }
...
Real(R)+Recip(G) space primitive vectors, cartesian coordinates (Bohr,Bohr^-1):
R(1)= 0.0000000 6.1314053 6.1314053 G(1)= -0.0815474 0.0815474 0.0815474
R(2)= 6.1314053 0.0000000 6.1314053 G(2)= 0.0815474 -0.0815474 0.0815474
R(3)= 6.1314053 6.1314053 0.0000000 G(3)= 0.0815474 0.0815474 -0.0815474
Unit cell volume ucvol= 4.6100971E+02 bohr^3
Angles (23,13,12)= 6.00000000E+01 6.00000000E+01 6.00000000E+01 degrees
Coarse grid specifications (used for wave-functions):
getcut: wavevector= 0.0000 0.0000 0.0000 ngfft= 32 32 32
ecut(hartree)= 15.000 => boxcut(ratio)= 2.11672
Fine grid specifications (used for densities):
getcut: wavevector= 0.0000 0.0000 0.0000 ngfft= 36 36 36
ecut(hartree)= 20.000 => boxcut(ratio)= 2.06228
--- Pseudopotential description ------------------------------------------------
- pspini: atom type 1 psp file is /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pbe_std/Sn-sp.xml
- pspatm: opening atomic psp file /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pbe_std/Sn-sp.xml
- pspatm : Reading pseudopotential header in XML form from /home/buildbot/ABINIT3/eos_gnu_13.2_mpich/trunk_merge-10.0/tests/Pspdir/Psdj_paw_pbe_std/Sn-sp.xml
Pseudopotential format is: paw10
basis_size (lnmax)= 5 (lmn_size= 13), orbitals= 0 0 1 1 2
Spheres core radius: rc_sph= 2.70161971
1 radial meshes are used:
- mesh 1: r(i)=AA*[exp(BB*(i-1))-1], size=2000 , AA= 0.13313E-03 BB= 0.66564E-02
Shapefunction is SIN type: shapef(r)=[sin(pi*r/rshp)/(pi*r/rshp)]**2
Radius for shape functions = 2.11181860
mmax= 2000
Radial grid used for partial waves is grid 1
Radial grid used for projectors is grid 1
Radial grid used for (t)core density is grid 1
Radial grid used for Vloc is grid 1
Radial grid used for pseudo valence density is grid 1
Mesh size for Vloc has been set to 1791 to avoid numerical noise.
Compensation charge density is not taken into account in XC energy/potential
pspatm: atomic psp has been read and splines computed
4.48630975E+02 ecore*ucvol(ha*bohr**3)
--------------------------------------------------------------------------------
_setup2: Arith. and geom. avg. npw (full set) are 1279.344 1279.331
================================================================================
--- !BeginCycle
iteration_state: {dtset: 1, }
solver: {iscf: 17, nstep: 10, nline: 4, wfoptalg: 10, }
tolerances: {tolvrs: 1.00E-18, }
...
iter Etot(hartree) deltaE(h) residm nres2
ETOT 1 -7.1862524588030 -7.186E+00 1.067E-02 3.876E-01
ETOT 2 -7.1952552281232 -9.003E-03 1.893E-05 8.652E-02
ETOT 3 -7.1949214387228 3.338E-04 4.080E-06 2.305E-03
ETOT 4 -7.1950130046635 -9.157E-05 5.965E-08 4.706E-04
ETOT 5 -7.1950434801506 -3.048E-05 3.877E-08 1.679E-05
ETOT 6 -7.1950452222841 -1.742E-06 7.657E-09 2.620E-07
ETOT 7 -7.1950452411065 -1.882E-08 3.707E-09 2.907E-08
ETOT 8 -7.1950452423531 -1.247E-09 1.132E-10 1.451E-09
ETOT 9 -7.1950452427296 -3.765E-10 7.665E-11 1.895E-11
ETOT 10 -7.1950452427080 2.161E-11 2.690E-12 3.715E-12
Cartesian components of stress tensor (hartree/bohr^3)
sigma(1 1)= -1.13131730E-04 sigma(3 2)= 0.00000000E+00
sigma(2 2)= -1.13131730E-04 sigma(3 1)= 0.00000000E+00
sigma(3 3)= -1.13131730E-04 sigma(2 1)= 0.00000000E+00
scprqt: WARNING -
nstep= 10 was not enough SCF cycles to converge;
density residual= 3.715E-12 exceeds tolvrs= 1.000E-18
--- !ResultsGS
iteration_state: {dtset: 1, }
comment : Summary of ground state results
lattice_vectors:
- [ 0.0000000, 6.1314053, 6.1314053, ]
- [ 6.1314053, 0.0000000, 6.1314053, ]
- [ 6.1314053, 6.1314053, 0.0000000, ]
lattice_lengths: [ 8.67112, 8.67112, 8.67112, ]
lattice_angles: [ 60.000, 60.000, 60.000, ] # degrees, (23, 13, 12)
lattice_volume: 4.6100971E+02
convergence: {deltae: 2.161E-11, res2: 3.715E-12, residm: 2.690E-12, diffor: null, }
etotal : -7.19504524E+00
entropy : 0.00000000E+00
fermie : 3.27566465E-02
cartesian_stress_tensor: # hartree/bohr^3
- [ -1.13131730E-04, 0.00000000E+00, 0.00000000E+00, ]
- [ 0.00000000E+00, -1.13131730E-04, 0.00000000E+00, ]
- [ 0.00000000E+00, 0.00000000E+00, -1.13131730E-04, ]
pressure_GPa: 3.3284E+00
xred :
- [ 0.0000E+00, 0.0000E+00, 0.0000E+00, Sn]
- [ 2.5000E-01, 2.5000E-01, 2.5000E-01, Sn]
cartesian_forces: # hartree/bohr
- [ -1.31746888E-28, 2.80259693E-45, 1.31746888E-28, ]
- [ 1.31746888E-28, 0.00000000E+00, -1.31746888E-28, ]
force_length_stats: {min: 1.86318236E-28, max: 1.86318236E-28, mean: 1.86318236E-28, }
...
Integrated electronic density in atomic spheres:
------------------------------------------------
Atom Sphere_radius Integrated_density
1 2.70162 2.57311322
2 2.70162 2.57311322
PAW TEST:
==== Compensation charge inside spheres ============
The following values must be close to each other ...
Compensation charge over spherical meshes = -0.895761332333397
Compensation charge over fine fft grid = -0.895747088166751
==== Results concerning PAW augmentation regions ====
Total pseudopotential strength Dij (hartree):
Atom # 1
0.36224 -0.83746 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
-0.83746 1.22189 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.07171 0.00000 0.00000 -0.20833 0.00000 0.00000 0.00000 0.00000 0.00000 0.00008 ...
0.00000 0.00000 0.00000 0.07171 0.00000 0.00000 -0.20833 0.00000 0.00008 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.07171 0.00000 0.00000 -0.20833 0.00000 0.00008 0.00000 0.00000 ...
0.00000 0.00000 -0.20833 0.00000 0.00000 0.24551 0.00000 0.00000 0.00000 0.00000 0.00000 -0.00014 ...
0.00000 0.00000 0.00000 -0.20833 0.00000 0.00000 0.24551 0.00000 -0.00014 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 -0.20833 0.00000 0.00000 0.24551 0.00000 -0.00014 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00008 0.00000 0.00000 -0.00014 0.00000 0.11557 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.00008 0.00000 0.00000 -0.00014 0.00000 0.11557 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.11555 0.00000 ...
0.00000 0.00000 0.00008 0.00000 0.00000 -0.00014 0.00000 0.00000 0.00000 0.00000 0.00000 0.11557 ...
... only 12 components have been written...
Atom # 2
0.36224 -0.83746 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
-0.83746 1.22189 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.07171 0.00000 0.00000 -0.20833 0.00000 0.00000 0.00000 0.00000 0.00000 -0.00008 ...
0.00000 0.00000 0.00000 0.07171 0.00000 0.00000 -0.20833 0.00000 -0.00008 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.07171 0.00000 0.00000 -0.20833 0.00000 -0.00008 0.00000 0.00000 ...
0.00000 0.00000 -0.20833 0.00000 0.00000 0.24551 0.00000 0.00000 0.00000 0.00000 0.00000 0.00014 ...
0.00000 0.00000 0.00000 -0.20833 0.00000 0.00000 0.24551 0.00000 0.00014 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 -0.20833 0.00000 0.00000 0.24551 0.00000 0.00014 0.00000 0.00000 ...
0.00000 0.00000 0.00000 -0.00008 0.00000 0.00000 0.00014 0.00000 0.11557 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 -0.00008 0.00000 0.00000 0.00014 0.00000 0.11557 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.11555 0.00000 ...
0.00000 0.00000 -0.00008 0.00000 0.00000 0.00014 0.00000 0.00000 0.00000 0.00000 0.00000 0.11557 ...
... only 12 components have been written...
Augmentation waves occupancies Rhoij:
Atom # 1
1.73937 0.02472 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
0.02472 0.00126 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
0.00000 0.00000 1.10085 0.00000 0.00000 0.02243 0.00000 0.00000 0.00000 0.00000 0.00000 0.12073 ...
0.00000 0.00000 0.00000 1.10085 0.00000 0.00000 0.02243 0.00000 0.12073 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 1.10085 0.00000 0.00000 0.02243 0.00000 0.12073 0.00000 0.00000 ...
0.00000 0.00000 0.02243 0.00000 0.00000 0.00057 0.00000 0.00000 0.00000 0.00000 0.00000 0.00270 ...
0.00000 0.00000 0.00000 0.02243 0.00000 0.00000 0.00057 0.00000 0.00270 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.02243 0.00000 0.00000 0.00057 0.00000 0.00270 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.12073 0.00000 0.00000 0.00270 0.00000 0.02403 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.12073 0.00000 0.00000 0.00270 0.00000 0.02403 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00686 0.00000 ...
0.00000 0.00000 0.12073 0.00000 0.00000 0.00270 0.00000 0.00000 0.00000 0.00000 0.00000 0.02403 ...
... only 12 components have been written...
Atom # 2
1.73937 0.02472 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
0.02472 0.00126 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ...
0.00000 0.00000 1.10085 0.00000 0.00000 0.02243 0.00000 0.00000 0.00000 0.00000 0.00000 -0.12073 ...
0.00000 0.00000 0.00000 1.10085 0.00000 0.00000 0.02243 0.00000 -0.12073 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 1.10085 0.00000 0.00000 0.02243 0.00000 -0.12073 0.00000 0.00000 ...
0.00000 0.00000 0.02243 0.00000 0.00000 0.00057 0.00000 0.00000 0.00000 0.00000 0.00000 -0.00270 ...
0.00000 0.00000 0.00000 0.02243 0.00000 0.00000 0.00057 0.00000 -0.00270 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.02243 0.00000 0.00000 0.00057 0.00000 -0.00270 0.00000 0.00000 ...
0.00000 0.00000 0.00000 -0.12073 0.00000 0.00000 -0.00270 0.00000 0.02403 0.00000 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 -0.12073 0.00000 0.00000 -0.00270 0.00000 0.02403 0.00000 0.00000 ...
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00686 0.00000 ...
0.00000 0.00000 -0.12073 0.00000 0.00000 -0.00270 0.00000 0.00000 0.00000 0.00000 0.00000 0.02403 ...
... only 12 components have been written...
Fermi-contact Term Calculation
Atom 1, typat 1: FC = 102.0748
Atom 2, typat 1: FC = 102.0748
================================================================================
----iterations are completed or convergence reached----
Mean square residual over all n,k,spin= 58.119E-15; max= 26.903E-13
reduced coordinates (array xred) for 2 atoms
0.000000000000 0.000000000000 0.000000000000
0.250000000000 0.250000000000 0.250000000000
rms dE/dt= 8.6556E-28; max dE/dt= 1.3463E-27; dE/dt below (all hartree)
1 -0.000000000000 0.000000000000 0.000000000000
2 0.000000000000 0.000000000000 -0.000000000000
cartesian coordinates (angstrom) at end:
1 0.00000000000000 0.00000000000000 0.00000000000000
2 1.62229997175232 1.62229997175232 1.62229997175232
cartesian forces (hartree/bohr) at end:
1 -0.00000000000000 0.00000000000000 0.00000000000000
2 0.00000000000000 0.00000000000000 -0.00000000000000
frms,max,avg= 1.0757088E-28 1.3174689E-28 0.000E+00 0.000E+00 0.000E+00 h/b
cartesian forces (eV/Angstrom) at end:
1 -0.00000000000000 0.00000000000000 0.00000000000000
2 0.00000000000000 0.00000000000000 -0.00000000000000
frms,max,avg= 5.5315168E-27 6.7746968E-27 0.000E+00 0.000E+00 0.000E+00 e/A
length scales= 12.262810608000 12.262810608000 12.262810608000 bohr
= 6.489199887009 6.489199887009 6.489199887009 angstroms
Fermi (or HOMO) energy (hartree) = 0.03276 Average Vxc (hartree)= -0.31746
Eigenvalues (hartree) for nkpt= 10 k points:
kpt# 1, nband= 5, wtk= 0.09375, kpt= -0.1250 -0.2500 0.0000 (reduced coord)
-0.32939 -0.09431 -0.00378 -0.00074 0.09777
prteigrs : prtvol=0 or 1, do not print more k-points.
--- !EnergyTerms
iteration_state : {dtset: 1, }
comment : Components of total free energy in Hartree
kinetic : 2.34377251261757E+00
hartree : 5.01301999992918E-01
xc : -8.60730675277015E+00
Ewald energy : -7.02846773561372E+00
psp_core : 9.73148648216591E-01
local_psp : -1.79261358947120E+00
spherical_terms : 6.41511922372649E+00
total_energy : -7.19504569330150E+00
total_energy_eV : -1.95787150250667E+02
...
--- !EnergyTermsDC
iteration_state : {dtset: 1, }
comment : '"Double-counting" decomposition of free energy'
band_energy : -1.05821158354743E+00
Ewald energy : -7.02846773561372E+00
psp_core : 9.73148648216591E-01
xc_dc : -5.29347329662785E+00
spherical_terms : 5.21195872486441E+00
total_energy_dc : -7.19504524270800E+00
total_energy_dc_eV : -1.95787137989394E+02
...
Cartesian components of stress tensor (hartree/bohr^3)
sigma(1 1)= -1.13131730E-04 sigma(3 2)= 0.00000000E+00
sigma(2 2)= -1.13131730E-04 sigma(3 1)= 0.00000000E+00
sigma(3 3)= -1.13131730E-04 sigma(2 1)= 0.00000000E+00
-Cartesian components of stress tensor (GPa) [Pressure= 3.3284E+00 GPa]
- sigma(1 1)= -3.32844986E+00 sigma(3 2)= 0.00000000E+00
- sigma(2 2)= -3.32844986E+00 sigma(3 1)= 0.00000000E+00
- sigma(3 3)= -3.32844986E+00 sigma(2 1)= 0.00000000E+00
== END DATASET(S) ==============================================================
================================================================================
-outvars: echo values of variables after computation --------
acell 1.2262810608E+01 1.2262810608E+01 1.2262810608E+01 Bohr
amu 1.18710000E+02
ecut 1.50000000E+01 Hartree
etotal -7.1950452427E+00
fcart -1.3174688785E-28 2.8025969286E-45 1.3174688785E-28
1.3174688785E-28 0.0000000000E+00 -1.3174688785E-28
- fftalg 512
ixc -101130
kpt -1.25000000E-01 -2.50000000E-01 0.00000000E+00
-1.25000000E-01 5.00000000E-01 0.00000000E+00
-2.50000000E-01 -3.75000000E-01 0.00000000E+00
-1.25000000E-01 -3.75000000E-01 1.25000000E-01
-1.25000000E-01 2.50000000E-01 0.00000000E+00
-2.50000000E-01 3.75000000E-01 0.00000000E+00
-3.75000000E-01 5.00000000E-01 0.00000000E+00
-2.50000000E-01 5.00000000E-01 1.25000000E-01
-1.25000000E-01 0.00000000E+00 0.00000000E+00
-3.75000000E-01 0.00000000E+00 0.00000000E+00
kptrlatt 4 -4 4 -4 4 4 -4 -4 4
kptrlen 4.90512424E+01
P mkmem 10
natom 2
nband 5
ngfft 32 32 32
ngfftdg 36 36 36
nkpt 10
nstep 10
nsym 48
ntypat 1
nucfc 1
occ 2.000000 2.000000 2.000000 2.000000 0.000000
pawecutdg 2.00000000E+01 Hartree
prtden 0
prteig 0
prtwf 0
rprim 0.0000000000E+00 5.0000000000E-01 5.0000000000E-01
5.0000000000E-01 0.0000000000E+00 5.0000000000E-01
5.0000000000E-01 5.0000000000E-01 0.0000000000E+00
shiftk 5.00000000E-01 5.00000000E-01 5.00000000E-01
spgroup 227
strten -1.1313173018E-04 -1.1313173018E-04 -1.1313173018E-04
0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
symrel 1 0 0 0 1 0 0 0 1 -1 0 0 0 -1 0 0 0 -1
0 -1 1 0 -1 0 1 -1 0 0 1 -1 0 1 0 -1 1 0
-1 0 0 -1 0 1 -1 1 0 1 0 0 1 0 -1 1 -1 0
0 1 -1 1 0 -1 0 0 -1 0 -1 1 -1 0 1 0 0 1
-1 0 0 -1 1 0 -1 0 1 1 0 0 1 -1 0 1 0 -1
0 -1 1 1 -1 0 0 -1 0 0 1 -1 -1 1 0 0 1 0
1 0 0 0 0 1 0 1 0 -1 0 0 0 0 -1 0 -1 0
0 1 -1 0 0 -1 1 0 -1 0 -1 1 0 0 1 -1 0 1
-1 0 1 -1 1 0 -1 0 0 1 0 -1 1 -1 0 1 0 0
0 -1 0 1 -1 0 0 -1 1 0 1 0 -1 1 0 0 1 -1
1 0 -1 0 0 -1 0 1 -1 -1 0 1 0 0 1 0 -1 1
0 1 0 0 0 1 1 0 0 0 -1 0 0 0 -1 -1 0 0
1 0 -1 0 1 -1 0 0 -1 -1 0 1 0 -1 1 0 0 1
0 -1 0 0 -1 1 1 -1 0 0 1 0 0 1 -1 -1 1 0
-1 0 1 -1 0 0 -1 1 0 1 0 -1 1 0 0 1 -1 0
0 1 0 1 0 0 0 0 1 0 -1 0 -1 0 0 0 0 -1
0 0 -1 0 1 -1 1 0 -1 0 0 1 0 -1 1 -1 0 1
1 -1 0 0 -1 1 0 -1 0 -1 1 0 0 1 -1 0 1 0
0 0 1 1 0 0 0 1 0 0 0 -1 -1 0 0 0 -1 0
-1 1 0 -1 0 0 -1 0 1 1 -1 0 1 0 0 1 0 -1
0 0 1 0 1 0 1 0 0 0 0 -1 0 -1 0 -1 0 0
1 -1 0 0 -1 0 0 -1 1 -1 1 0 0 1 0 0 1 -1
0 0 -1 1 0 -1 0 1 -1 0 0 1 -1 0 1 0 -1 1
-1 1 0 -1 0 1 -1 0 0 1 -1 0 1 0 -1 1 0 0
tnons 0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
0.0000000 0.0000000 0.0000000 0.2500000 0.2500000 0.2500000
tolvrs 1.00000000E-18
typat 1 1
useylm 1
wtk 0.09375 0.09375 0.09375 0.18750 0.09375 0.09375
0.09375 0.18750 0.03125 0.03125
xangst 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
1.6222999718E+00 1.6222999718E+00 1.6222999718E+00
xcart 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
3.0657026520E+00 3.0657026520E+00 3.0657026520E+00
xred 0.0000000000E+00 0.0000000000E+00 0.0000000000E+00
2.5000000000E-01 2.5000000000E-01 2.5000000000E-01
znucl 50.00000
================================================================================
- Timing analysis has been suppressed with timopt=0
================================================================================
Suggested references for the acknowledgment of ABINIT usage.
The users of ABINIT have little formal obligations with respect to the ABINIT group
(those specified in the GNU General Public License, http://www.gnu.org/copyleft/gpl.txt).
However, it is common practice in the scientific literature,
to acknowledge the efforts of people that have made the research possible.
In this spirit, please find below suggested citations of work written by ABINIT developers,
corresponding to implementations inside of ABINIT that you have used in the present run.
Note also that it will be of great value to readers of publications presenting these results,
to read papers enabling them to understand the theoretical formalism and details
of the ABINIT implementation.
For information on why they are suggested, see also https://docs.abinit.org/theory/acknowledgments.
-
- [1] Computation of Moessbauer isomer shifts from first principles.
- J.W. Zwanziger, J. Phys. Conden. Matt. 21, 15024-15036 (2009).
- Comment: to be cited in case the computation of Fermi contact interactions for isomer shifts, i.e. nucfc=1 and usepaw=1.
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#zwanziger2009
-
- [2] Implementation of the Projector Augmented-Wave Method in the ABINIT code.
- M. Torrent, F. Jollet, F. Bottin, G. Zerah, and X. Gonze Comput. Mat. Science 42, 337, (2008).
- Comment: PAW calculations. Strong suggestion to cite this paper.
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#torrent2008
-
- [3] Libxc: A library of exchange and correlation functionals for density functional theory.
- M.A.L. Marques, M.J.T. Oliveira, T. Burnus, Computer Physics Communications 183, 2227 (2012).
- Comment: to be cited when LibXC is used (negative value of ixc)
- Strong suggestion to cite this paper.
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#marques2012
-
- [4] The Abinit project: Impact, environment and recent developments.
- Computer Phys. Comm. 248, 107042 (2020).
- X.Gonze, B. Amadon, G. Antonius, F.Arnardi, L.Baguet, J.-M.Beuken,
- J.Bieder, F.Bottin, J.Bouchet, E.Bousquet, N.Brouwer, F.Bruneval,
- G.Brunin, T.Cavignac, J.-B. Charraud, Wei Chen, M.Cote, S.Cottenier,
- J.Denier, G.Geneste, Ph.Ghosez, M.Giantomassi, Y.Gillet, O.Gingras,
- D.R.Hamann, G.Hautier, Xu He, N.Helbig, N.Holzwarth, Y.Jia, F.Jollet,
- W.Lafargue-Dit-Hauret, K.Lejaeghere, M.A.L.Marques, A.Martin, C.Martins,
- H.P.C. Miranda, F.Naccarato, K. Persson, G.Petretto, V.Planes, Y.Pouillon,
- S.Prokhorenko, F.Ricci, G.-M.Rignanese, A.H.Romero, M.M.Schmitt, M.Torrent,
- M.J.van Setten, B.Van Troeye, M.J.Verstraete, G.Zerah and J.W.Zwanzig
- Comment: the fifth generic paper describing the ABINIT project.
- Note that a version of this paper, that is not formatted for Computer Phys. Comm.
- is available at https://www.abinit.org/sites/default/files/ABINIT20.pdf .
- The licence allows the authors to put it on the Web.
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#gonze2020
-
- [5] ABINIT: Overview, and focus on selected capabilities
- J. Chem. Phys. 152, 124102 (2020).
- A. Romero, D.C. Allan, B. Amadon, G. Antonius, T. Applencourt, L.Baguet,
- J.Bieder, F.Bottin, J.Bouchet, E.Bousquet, F.Bruneval,
- G.Brunin, D.Caliste, M.Cote,
- J.Denier, C. Dreyer, Ph.Ghosez, M.Giantomassi, Y.Gillet, O.Gingras,
- D.R.Hamann, G.Hautier, F.Jollet, G. Jomard,
- A.Martin,
- H.P.C. Miranda, F.Naccarato, G.Petretto, N.A. Pike, V.Planes,
- S.Prokhorenko, T. Rangel, F.Ricci, G.-M.Rignanese, M.Royo, M.Stengel, M.Torrent,
- M.J.van Setten, B.Van Troeye, M.J.Verstraete, J.Wiktor, J.W.Zwanziger, and X.Gonze.
- Comment: a global overview of ABINIT, with focus on selected capabilities .
- Note that a version of this paper, that is not formatted for J. Chem. Phys
- is available at https://www.abinit.org/sites/default/files/ABINIT20_JPC.pdf .
- The licence allows the authors to put it on the Web.
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#romero2020
-
- [6] Recent developments in the ABINIT software package.
- Computer Phys. Comm. 205, 106 (2016).
- X.Gonze, F.Jollet, F.Abreu Araujo, D.Adams, B.Amadon, T.Applencourt,
- C.Audouze, J.-M.Beuken, J.Bieder, A.Bokhanchuk, E.Bousquet, F.Bruneval
- D.Caliste, M.Cote, F.Dahm, F.Da Pieve, M.Delaveau, M.Di Gennaro,
- B.Dorado, C.Espejo, G.Geneste, L.Genovese, A.Gerossier, M.Giantomassi,
- Y.Gillet, D.R.Hamann, L.He, G.Jomard, J.Laflamme Janssen, S.Le Roux,
- A.Levitt, A.Lherbier, F.Liu, I.Lukacevic, A.Martin, C.Martins,
- M.J.T.Oliveira, S.Ponce, Y.Pouillon, T.Rangel, G.-M.Rignanese,
- A.H.Romero, B.Rousseau, O.Rubel, A.A.Shukri, M.Stankovski, M.Torrent,
- M.J.Van Setten, B.Van Troeye, M.J.Verstraete, D.Waroquier, J.Wiktor,
- B.Xu, A.Zhou, J.W.Zwanziger.
- Comment: the fourth generic paper describing the ABINIT project.
- Note that a version of this paper, that is not formatted for Computer Phys. Comm.
- is available at https://www.abinit.org/sites/default/files/ABINIT16.pdf .
- The licence allows the authors to put it on the Web.
- DOI and bibtex: see https://docs.abinit.org/theory/bibliography/#gonze2016
-
- Proc. 0 individual time (sec): cpu= 2.8 wall= 2.8
================================================================================
Calculation completed.
.Delivered 2 WARNINGs and 2 COMMENTs to log file.
+Overall time at end (sec) : cpu= 2.8 wall= 2.8