abinit/doc/topics/_GSintroduction.md

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How to build an input file for a ground state calculation FJ

This page gives hints on how to build an input file for a ground state calculation with the ABINIT package.

Introduction

The computation of the ground state energy of an assembly of nuclei and electrons placed in a repeated cell can be done using (1) plane waves and norm-conserving pseudopotentials, or, (2) so-called "Projector-Augmented Waves" (PAW method), with appropriate pseudoatomic data, or (3) wavelets. The wavelet framework is described topic:Wavelets.

In the plane wave framework, the program admits many different types of pseudopotentials. There are several complete sets of norm-conserving pseudopotentials available for most elements of the periodic table.

The recommended tables (GGA-PBE, GGA-PBEsol and LDA) come from the |pseudodojo| project with ONCVPSP pseudopotentials (cite:Hamann2013) both in scalar-relativistic format and fully-relativistic version with spin-orbit coupling. For PAW calculation,the recommended one (GGA-PBE and LDA) is the JTH table in the PAW XML format (cite:Jollet2014).

The choice between norm-conserving pseudopotentials or PAW is deduced automatically by the choice of the pseudopotential in the "files" file. An input file must specify the following items:

An example of a minimal input file to calculate the ground state of crystalline aluminium is given here:

# Crystalline aluminum. Calculation of the total energy
# at fixed number of k points and broadening.

#Definition of occupation numbers
occopt 4
tsmear 0.05

#Definition of the unit cell
acell 3*7.60           # This is equivalent to   7.60 7.60 7.60
rprim  0.0  0.5  0.5   # FCC primitive vectors (to be scaled by acell)
       0.5  0.0  0.5
       0.5  0.5  0.0

#Definition of the atom types
ntypat 1          # There is only one type of atom
znucl 13          # The keyword "znucl" refers to the atomic number of the
                  # possible type(s) of atom. The pseudopotential(s)
                  # mentioned in the "files" file must correspond
                  # to the type(s) of atom. Here, the only type is Aluminum

#Definition of the atoms
natom 1           # There is only one atom per cell
typat 1           # This atom is of type 1, that is, Aluminum
xred  0.0  0.0  0.0 # This keyword indicate that the location of the atoms
                    # will follow, one triplet of number for each atom
                    # Triplet giving the REDUCED coordinate of atom 1.

#Definition of the planewave basis set
ecut  6.0         # Maximal kinetic energy cut-off, in Hartree
pawecutdg  10.0   #Maximal kinetic energy cut-off, in Hartree for the fine grid in case of PAW calculation

#Definition of the k-point grid
ngkpt 2 2 2       # This is a 2x2x2 FCC grid, based on the primitive vectors
chksymbreak 0
#Definition of the SCF procedure
nstep 10          # Maximal number of SCF cycles
toldfe 1.0d-6     # Will stop when, twice in a row, the difference
                  # between two consecutive evaluations of total energy
                  # differ by less than toldfe (in Hartree)
                  # This value is way too large for most realistic studies of materials       

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Selected Input Files

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Tutorials

  • tutorial:base1 deals with the H2 molecule: get the total energy, the electronic energies, the charge density, the bond length, the atomisation energy
  • tutorial:base2 deals again with the H2 molecule: convergence studies, LDA versus GGA
  • tutorial:base3 deals with crystalline silicon (an insulator): the definition of a k-point grid, the smearing of the cut-off energy, the computation of a band structure, and again, convergence studies ...
  • tutorial:base4] deals with crystalline aluminum (a metal), and its surface: occupation numbers, smearing the Fermi-Dirac distribution, the surface energy, and again, convergence studies ...