Fix log with CSS Important, remove old partials

2021-03-19 23:47:41 +01:00 · 2021-03-19 23:47:41 +01:00 · 57ce104f12
parent 0f30baf150
commit 57ce104f12
9 changed files with 17 additions and 505 deletions
--- a/abimkdocs/variables_abinit.py
+++ b/abimkdocs/variables_abinit.py
@ -629,10 +629,10 @@ Variable(
  * 1 --> the polarization will be kept in the same branch on each iteration.
    At the end of the run, a file "POLSAVE" will be saved containing the reduced polarization in atomic units.

-    !!! note
+!!! note

-        Make sure that "POLSAVE" is empty or it does not exist before the calculation, or else that
-        it specifies the desired polarization branch.
+    Make sure that "POLSAVE" is empty or it does not exist before the calculation, or else that
+    it specifies the desired polarization branch.
 """,
 ),

@ -21475,7 +21475,7 @@ allocated for the wavefunctions, especially when we have to sum over empty state
    parallelize along this dimension. The parallelization over q-points seem to be more efficient than
    the one over perturbations although it introduces some load imbalance because, due to memory reasons,
    the code distributes the q-points in the IBZ (nqibz) instead of the q-points in the full BZ (nqbz).
-    Moreover non all the q-points in the IBZ contribute to the imaginary part of $\Sigma_nk$.
+    Moreover non all the q-points in the IBZ contribute to the imaginary part of $\Sigma_{nk}$.
    The MPI parallelism over k-points and spins is supported with similar behaviour as in **eph_task** +4.


@ -21668,9 +21668,9 @@ to integrate the Frohlich divergence.

 Possible values:

-    - = 0 --> Approximate oscillators with $ \delta_{b_1 b_2} $
-    - > 0 --> Use full expression with G-dependence
-    - < 0 --> Deactivate computation of oscillators.
+- = 0 --> Approximate oscillators with $ \delta_{b_1 b_2} $
+- > 0 --> Use full expression with G-dependence
+- < 0 --> Deactivate computation of oscillators.

 !!! important

@ -22054,9 +22054,9 @@ to go from $W(\rr,\RR)$ to $v1scf(\rr,\qq)$.

 Possible values are:

-    0 --> Use unit super cell for $\RR$ space. All weights set to 1.
-    1 --> Use Wigner-Seitz super cell and atom-dependent weights (same algorithm as for the dynamical matrix).
-          Note that this option leads to more $\RR$-points with a non-negligible increase of the memory allocated.
+0 --> Use unit super cell for $\RR$ space. All weights set to 1.
+1 --> Use Wigner-Seitz super cell and atom-dependent weights (same algorithm as for the dynamical matrix).
+      Note that this option leads to more $\RR$-points with a non-negligible increase of the memory allocated.

 !!! tip

--- a/abinit_theme/main.html
+++ b/abinit_theme/main.html
@ -156,7 +156,7 @@
        <!-- Plotly support -->
        <script type="text/javascript" src="https://cdn.plot.ly/plotly-latest.min.js"></script> 
    {% endif %}
-    
+
    {% if page.meta and page.meta.light_gallery %}
        <!-- lightgallery support. See https://github.com/sachinchoolur/lightGallery-->
        <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/lightgallery/1.6.0/css/lightgallery.min.css" 
@ -219,14 +219,6 @@ and return to Top button (based on https://codepen.io/rdallaire/pen/apoyx)
 </div>
 {% endblock %}

-{% block footer %}
-    <!-- Add tabs to footer -->
-    {% if config.theme.features.tabs %}
-        {% include "partials/tabs.html" %}
-    {% endif %}
-    {{ super() }}
-{% endblock %}
-
 <!--
 MkDocs version : {{ mkdocs_version }}
 Build Date UTC : {{ build_date_utc }}
--- a/abinit_theme/old_main.html
+++ b/abinit_theme/old_main.html
@ -1,280 +0,0 @@
-{% extends "base.html" %}
-
-{% block libs %}
-    {{ super() }}
-
-    <!-- Jquery from Google CDN -->
-    <script src="https://ajax.googleapis.com/ajax/libs/jquery/3.2.1/jquery.min.js"></script>
-
-    <!-- Load Jquery UI -->
-    <script src="https://code.jquery.com/ui/1.12.1/jquery-ui.min.js"></script>
-    <!-- Handle jQuery plugin naming conflict between jQuery UI and Bootstrap 
-    https://stackoverflow.com/questions/13731400/jqueryui-tooltips-are-competing-with-twitter-bootstrap
-    -->
-    <script>
-      $.widget.bridge('uibutton', $.ui.button);
-      $.widget.bridge('uitooltip', $.ui.tooltip);
-    </script>
-
-    <!--
-    <link rel="stylesheet" href="https://code.jquery.com/ui/1.12.1/themes/smoothness/jquery-ui.css">
-    <link rel="stylesheet" href="https://code.jquery.com/ui/1.12.1/themes/pepper-grinder/jquery-ui.css">
-    -->
-    <link rel="stylesheet" href="https://code.jquery.com/ui/1.12.1/themes/base/jquery-ui.css">
-
-    <!-- Bootstrap theme -->
-    <link rel="stylesheet" href="//cdn.jsdelivr.net/npm/alertifyjs@1.11.0/build/css/themes/bootstrap.min.css"/>
-
-    <!-- Bootstrap http://getbootstrap.com/getting-started/ -->
-    <!-- Latest compiled and minified CSS -->
-    <link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/css/bootstrap.min.css" 
-    integrity="sha384-BVYiiSIFeK1dGmJRAkycuHAHRg32OmUcww7on3RYdg4Va+PmSTsz/K68vbdEjh4u" crossorigin="anonymous">
-
-    <!-- Optional theme -->
-    <link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/css/bootstrap-theme.min.css" 
-    integrity="sha384-rHyoN1iRsVXV4nD0JutlnGaslCJuC7uwjduW9SVrLvRYooPp2bWYgmgJQIXwl/Sp" crossorigin="anonymous">
-
-    <!-- Latest compiled and minified JavaScript -->
-    <script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" 
-    integrity="sha384-Tc5IQib027qvyjSMfHjOMaLkfuWVxZxUPnCJA7l2mCWNIpG9mGCD8wGNIcPD7Txa" crossorigin="anonymous">
-    </script>
-
-    <!-- font-awesome -->
-    <link href="https://maxcdn.bootstrapcdn.com/font-awesome/4.7.0/css/font-awesome.min.css" rel="stylesheet" integrity="sha384-wvfXpqpZZVQGK6TAh5PVlGOfQNHSoD2xbE+QkPxCAFlNEevoEH3Sl0sibVcOQVnN" crossorigin="anonymous">
-
-    {% if page.meta and page.meta.bootstrap_table %}
-        <!-- Support for bootstrap table http://bootstrap-table.wenzhixin.net.cn/ -->
-        <link rel="stylesheet" href="//cdnjs.cloudflare.com/ajax/libs/bootstrap-table/1.11.1/bootstrap-table.min.css">
-        <script src="//cdnjs.cloudflare.com/ajax/libs/bootstrap-table/1.11.1/bootstrap-table.min.js"></script>
-    {% endif %}
-
-    <!--Pace support. http://github.hubspot.com/pace/ -->
-    <script>
-        paceOptions = {
-            ajax: true,      // disabled
-            document: true,  // activated
-            eventLag: false  // disabled
-            //target: 'article'
-            //elements: {selectors: ['.my-page']}
-        };
-    </script>
-
-    <script src="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/pace.min.js"></script>
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/white/pace-theme-big-counter.min.css" />
-    <!--
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/white/pace-theme-bounce.min.css" />
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/blue/pace-theme-corner-indicator.min.css" />
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/blue/pace-theme-flat-top.min.css" />
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/blue/pace-theme-loading-bar.min.css" />
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/blue/pace-theme-center-atom.css" />
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/pace/1.0.2/themes/blue/pace-theme-flash.min.css" />
-    -->
-
-    <!-- MathJax support
-    <script type="text/javascript" async 
-        src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-MML-AM_CHTML">
-    </script> 
-    -->
-    <!--
-    This is compatible with plotly.
-    -->
-    <script type="text/javascript" async 
-        src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_SVG">
-    </script> 
-
-    <!--
-    Configure MathJax to produce automatic equation numbers http://docs.mathjax.org/en/latest/tex.html
-    -->
-    <script type="text/x-mathjax-config">
-      MathJax.Hub.Config({
-        //jax: ["input/TeX","output/HTML-CSS"],
-        //tex2jax: {inlineMath: [['$','$']]},
-        //displayAlign: "center",
-        TeX: {
-            equationNumbers: { autoNumber: "AMS" },
-            extensions: ["AMSmath.js", "boldsymbol.js"],
-            Macros: {
-                "*": "{\\dagger}",
-                "ra": "{\\rangle}",
-                "la": "{\\langle}",
-                // Workaround for bm package. See https://github.com/mathjax/MathJax/issues/1219
-                bm: ["{\\boldsymbol #1}",1],
-                // Mathcal symbols
-                mcL: "{\\mathcal{L}}",
-                mcG: "{\\mathcal{G}}",
-                mcR: "{\\mathcal{R}}",
-                mcS: "{\\mathcal{S}}",
-                mcC: "{\\mathcal{C}}",
-                mcO: "{\\mathcal{O}}",
-                // Acronyms
-                KS: "{\\text{KS}}",
-                eph: "{\\text{e-ph}}",
-                ee: "{\\text{e-e}}",
-                phph: "{\\text{ph-ph}}",
-                FM: "{\\text{FM}}",
-                DW: "{\\text{DW}}",
-                QP: "{\\text{QP}}",
-                BZ: "{\\text{BZ}}",
-                sign: "{\\text{sign}}",
-                xc: "{\\text{xc}}",
-                tchi: "{\\tilde\\chi}",
-                // Symbols commonly used (k-points, eigenvalues ...)
-                rr: "{\\bf r}",
-                RR: "{\\bf R}",
-                tt: "{\\bf t}",
-                GG: "{\\bf G}",
-                kk: "{\\bf k}",
-                qq: "{\\bf q}",
-                kq: "{\\kk + \\qq}",
-                qG: "{\\bf q + G}",
-                kG: "{\\bf k + G}",
-                kmq: "{\\kk - \\qq}",
-                kpq: "{\\kk + \\qq}",
-                kpG: "{\\kk + \\GG}",
-                qpG: "{\\qq + \\GG}",
-                nk: "{n \\kk}",
-                enk: "{\\varepsilon_\\nk}",
-                emkq: "{\\varepsilon_{m\\kk+\\qq}}",
-                qnu: "{\\qq \\nu}",
-                wqnu: "{\\omega_{\\qnu}}",
-                vnk: "{\\mathbf{v}_{n\\kk}}",
-                vmkq: "{\\mathbf{v}_{m\\kk+\\qq}}",
-                vnka: "{\\mathrm{v}_{n\\kk,\\alpha}}",
-                vnkb: "{\\mathrm{v}_{n\\kk,\\beta}}",
-                ef: "{\\varepsilon_F}",
-                // EPH quantities
-                gkkp: "{g_{mn\\nu}(\\kk,\\qq)}",
-                gkq: "{g_{mn\\nu}(\\kk,\\qq)}",
-                //\newcommand{\gkkpL}{g_{mn\nu}^\Lc(\kb,\qb)}
-                // Many-body theory
-                Go: "{G_0}",
-                Wo: "{W_0}",
-                Ueff: "{U_{\\text{eff}}}",
-                // Greek symbols + tilde version
-                ee: "{\\epsilon}",
-                tee: "{\\tilde{\\epsilon}}",
-                ww: "{\\omega}",
-                tww: "{\\tilde\\omega}",
-                dd: "{\\,\\text{d}}",
-                vxc: "{v_\\xc}",
-                // symrel
-                Ri: "{\\mcR^{-1}}",
-                Rit: "{\\mcR^{-1\\tau}}",
-                // symrec
-                Si: "{\\mcS^{-1}}}",
-                Sit: "{\\Si^\\tau}}",
-                // partial and functional derivative.
-                PDER: ["{\\dfrac{\\partial #1}{\\partial #2}}", 2],
-                FDER: ["{\\dfrac{\\delta #1}{\\delta #2}}", 2],
-                // PAW
-                tPsi: "{\\tilde\\Psi}",
-                tpsi: "{\\tilde\\psi}",
-                tPhi: "{\\tilde\\Phi}",
-                tphi: "{\\tilde\\phi}",
-                tprj: "{\\tilde p}"
-            }
-          }
-      });
-    </script>
-
-    <!-- See http://docs.mathjax.org/en/latest/start.html 
-    <script type="text/x-mathjax-config">
-    MathJax.Hub.Config({
-        extensions: ["tex2jax.js", "MathMenu.js", "MathZoom.js"],
-        jax: ["input/TeX", "output/HTML-CSS", "output/NativeMML],
-        tex2jax: {
-            inlineMath: [ ['$','$'], ["\\(","\\)"] ],
-            displayMath: [ ['$$','$$'], ["\\[","\\]"] ],
-            processEscapes: true
-        },
-        "HTML-CSS": { availableFonts: ["TeX"] }
-      });
-    </script>
-    -->
-
-    {% if page.meta and page.meta.plotly %}
-        <!-- Plotly support -->
-        <script type="text/javascript" src="https://cdn.plot.ly/plotly-latest.min.js"></script> 
-    {% endif %}
-    
-    {% if page.meta and page.meta.light_gallery %}
-        <!-- lightgallery support. See https://github.com/sachinchoolur/lightGallery-->
-        <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/lightgallery/1.6.0/css/lightgallery.min.css" 
-            integrity="sha256-6hdzBLI5YrM1ltRrsPdV0y2CsqGgLYCeNlLFFQoh7MY=" crossorigin="anonymous" />
-
-        <!-- A jQuery plugin that adds cross-browser mouse wheel support. (Optional) -->
-        <script src="https://cdnjs.cloudflare.com/ajax/libs/jquery-mousewheel/3.1.13/jquery.mousewheel.min.js"></script>
-
-        <script src="https://cdnjs.cloudflare.com/ajax/libs/lightgallery/1.6.0/js/lightgallery-all.min.js" 
-            integrity="sha256-n9ZE2vNe6Iv4S6dUXnzuvvt2yLWOZPJqD787TC7S4W4=" crossorigin="anonymous"></script>
-    {% endif %}
-
-    <!-- Introjs for Guided Tour -->
-    <script src="https://cdnjs.cloudflare.com/ajax/libs/intro.js/2.7.0/intro.min.js"></script>
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/intro.js/2.7.0/introjs.min.css" />
-
-    <!-- Load fonts used for input variables -->
-    <!--
-    <link href="https://fonts.googleapis.com/css?family=Ubuntu+Mono" rel="stylesheet">
-    -->
-    <link href="https://fonts.googleapis.com/css?family=Inconsolata" rel="stylesheet">
-{% endblock %}
-
-{% block content %}
-{{ super() }}
-
-<!-- 
-add dropdown button with toolbar (based on https://bootsnipp.com/snippets/featured/inbox-by-gmail)
-and return to Top button (based on https://codepen.io/rdallaire/pen/apoyx)
-->
-<div class="md-container">
-  <div class="row">
-    <div id="inbox">
-      <div class="fab btn-group show-on-hover dropup">
-        <div data-toggle="tooltip" data-placement="left" title="Menu" style="margin-left: 42px;">
-          <button id="return-to-top" type="button" class="btn btn-primary btn-io dropdown-toggle" data-toggle="dropdown">
-            <span class="fa-stack fa-2x">
-                <i class="fa fa-circle fa-stack-2x fab-backdrop"></i>
-                <i class="fa fa-chevron-up fa-stack-1x fa-inverse fab-primary"></i>
-                <i class="fa fa-map-signs fa-stack-1x fa-inverse fab-secondary"></i>
-            </span>
-          </button>
-        </div>
-        <ul class="dropdown-menu dropdown-menu-right" role="menu">
-        {% set icons = [
-          "fa-info-circle",
-          "fa-terminal", 
-          "fa-book", 
-          "fa-graduation-cap", 
-          "fa-file-text-o", 
-          "fa-question", 
-          "fa-user-circle-o", 
-          ] %}
-        {% for nav_item in nav | reverse %}
-          <li><a href="{{ (nav_item.children | first).url }}" data-toggle="tooltip" data-placement="left" 
-                  title="{{ nav_item.title }}"><i class="fa {{ icons[loop.index0] }}"></i></a></li>
-        {% endfor %}
-        <!--
-        Example: 
-        <li><a href="/index.html" data-toggle="tooltip" data-placement="left" title="User-Guide">
-              <i class="fa fa-user-circle-o"></i></a></li>
-        -->
-        </ul>
-      </div>
-    </div>
-  </div>
-</div>
-{% endblock %}
-
-{% block footer %}
-    <!-- Add tabs to footer -->
-    {% if config.theme.features.tabs %}
-        {% include "partials/tabs.html" %}
-    {% endif %}
-    {{ super() }}
-{% endblock %}
-
-<!--
-MkDocs version : {{ mkdocs_version }}
-Build Date UTC : {{ build_date_utc }}
-->
--- a/abinit_theme/partials/header.html
+++ b/abinit_theme/partials/header.html
@ -1,63 +0,0 @@
-{#-
-  This file was automatically generated - do not edit
-#}
-<header class="md-header" data-md-component="header">
-  <nav class="md-header__inner md-grid" aria-label="{{ lang.t('header.title') }}">
-    <a href="{{ config.extra.homepage | d(nav.homepage.url, true) | url }}" title="{{ config.site_name | e }}" class="md-header__button md-logo" aria-label="{{ config.site_name }}" data-md-component="logo">
-      {% include "partials/logo.html" %}
-    </a>
-    <label class="md-header__button md-icon" for="__drawer">
-      {% include ".icons/material/menu" ~ ".svg" %}
-    </label>
-    <div class="md-header__title" data-md-component="header-title">
-      <div class="md-header__ellipsis">
-        <div class="md-header__topic">
-          <span class="md-ellipsis">
-            {{ config.site_name }}
-          </span>
-        </div>
-        <div class="md-header__topic" data-md-component="header-topic">
-          <span class="md-ellipsis">
-            {% if page and page.meta and page.meta.title %}
-              {{ page.meta.title }}
-            {% else %}
-              {{ page.title }}
-            {% endif %}
-          </span>
-        </div>
-      </div>
-    </div>
-    <div class="md-header__options">
-      {% if config.extra.alternate %}
-        <div class="md-select">
-          {% set icon = config.theme.icon.alternate or "material/translate" %}
-          <span class="md-header__button md-icon">
-            {% include ".icons/" ~ icon ~ ".svg" %}
-          </span>
-          <div class="md-select__inner">
-            <ul class="md-select__list">
-              {% for alt in config.extra.alternate %}
-                <li class="md-select__item">
-                  <a href="{{ alt.link | url }}" class="md-select__link">
-                    {{ alt.name }}
-                  </a>
-                </li>
-                {% endfor %}
-            </ul>
-          </div>
-        </div>
-      {% endif %}
-    </div>
-    {% if "search" in config["plugins"] %}
-      <label class="md-header__button md-icon" for="__search">
-        {% include ".icons/material/magnify.svg" %}
-      </label>
-      {% include "partials/search.html" %}
-    {% endif %}
-    {% if config.repo_url %}
-      <div class="md-header__source">
-        {% include "partials/source.html" %}
-      </div>
-    {% endif %}
-  </nav>
-</header>
--- a/abinit_theme/partials/old_footer.html
+++ b/abinit_theme/partials/old_footer.html
@ -1,67 +0,0 @@
-{% import "partials/language.html" as lang with context %}
-<footer class="md-footer">
-  {% if page.previous_page or page.next_page %}
-    <div class="md-footer-nav">
-      <nav class="md-footer-nav__inner md-grid">
-        {% if page.previous_page %}
-          <a href="{{ page.previous_page.url }}" title="{{ page.previous_page.title }}" class="md-flex md-footer-nav__link md-footer-nav__link--prev" rel="prev">
-            <div class="md-flex__cell md-flex__cell--shrink">
-              <i class="md-icon md-icon--arrow-back md-footer-nav__button"></i>
-            </div>
-            <div class="md-flex__cell md-flex__cell--stretch md-footer-nav__title">
-              <span class="md-flex__ellipsis">
-                <span class="md-footer-nav__direction">
-                  {{ lang.t("footer.previous") }}
-                </span>
-                {{ page.previous_page.title }}
-              </span>
-            </div>
-          </a>
-        {% endif %}
-        {% if page.next_page %}
-          <a href="{{ page.next_page.url }}" title="{{ page.next_page.title }}" class="md-flex md-footer-nav__link md-footer-nav__link--next" rel="next">
-            <div class="md-flex__cell md-flex__cell--stretch md-footer-nav__title">
-              <span class="md-flex__ellipsis">
-                <span class="md-footer-nav__direction">
-                  {{ lang.t("footer.next") }}
-                </span>
-                {{ page.next_page.title }}
-              </span>
-            </div>
-            <div class="md-flex__cell md-flex__cell--shrink">
-              <i class="md-icon md-icon--arrow-forward md-footer-nav__button"></i>
-            </div>
-          </a>
-        {% endif %}
-      </nav>
-    </div>
-  {% endif %}
-  <div class="md-footer-meta md-typeset">
-    <div class="md-footer-meta__inner md-grid">
-      <div class="md-footer-copyright">
-        {% if config.extra.version %}
-            <center>Abinit version {{ config.extra.version }}</center>
-        {% endif %}
-        {% if config.copyright and page.meta and page.meta.authors %}
-          <div class="md-footer-copyright__highlight">
-            {{ config.copyright }} ({{ page.meta.authors }})
-          </div>
-        {% elif config.copyright %}
-          <div class="md-footer-copyright__highlight">
-            {{ config.copyright }}
-          </div>
-        {% endif %}
-        powered by
-        <a href="http://www.mkdocs.org">MkDocs</a>
-        and
-        <a href="https://squidfunk.github.io/mkdocs-material/">
-          Material for MkDocs</a>
-      </div>
-      {% if False %}
-      {% block social %}
-        {% include "partials/social.html" %}
-      {% endblock %}
-      {% endif %}
-    </div>
-  </div>
-</footer>
--- a/abinit_theme/partials/old_header.html
+++ b/abinit_theme/partials/old_header.html
@ -1,70 +0,0 @@
-<header class="md-header" data-md-component="header">
-  <nav class="md-header-nav md-grid">
-    <div class="md-flex">
-      <div class="md-flex__cell md-flex__cell--shrink">
-        <a href="https://www.abinit.org" title="{{ config.site_name }}" class="md-header-nav__button md-logo">
-          {% if config.theme.icon.logo %}
-            <i class="md-icon">{{ config.theme.icon.logo }}</i>
-          {% else %}
-            <img src="{{ base_url }}/{{ config.theme.logo }}" width="48" height="48">
-          {% endif %}
-        </a>
-      </div>
-      <div class="md-flex__cell md-flex__cell--shrink">
-        <label class="md-icon md-icon--menu md-header-nav__button" for="drawer"></label>
-      </div>
-      <div class="md-flex__cell md-flex__cell--stretch">
-        <span class="md-flex__ellipsis md-header-nav__title">
-          {% block site_name %}
-            {% if page %}
-              {% for parent in page.ancestors %}
-                <span class="md-header-nav__parent">
-                  {{ parent.title }}
-                </span>
-              {% endfor %}
-            {% endif %}
-            {{ page.title | default(config.site_name, true) }}
-          {% endblock %}
-        </span>
-      </div>
-      <!-- Guided Tour with introjs. Add glow effect to button only if homepage -->
-      <div class="md-flex__cell md-flex__cell--shrink">
-          {% set glow = ' ' %} 
-          {% if page and page.is_homepage %}
-            {% set glow = 'glow' %}
-          {% endif %}
-          <a href="#" class="btn btn-xs btn-default {{glow}}" id="guided-tour-button" title="Guided Tour" 
-              onclick="abidocs_guidedtour()">
-           <span class="fa fa-info-circle"></span></a>
-      </div>
-      <div class="md-flex__cell md-flex__cell--shrink">
-        {% block search_box %}
-          {% if "search" in config["plugins"] %}
-            <label class="md-icon md-icon--search md-header-nav__button" for="search"></label>
-            {% include "partials/search.html" %}
-          {% endif %}
-        {% endblock %}
-      </div>
-      {% if config.repo_url %}
-        <div class="md-flex__cell md-flex__cell--shrink">
-          <div class="md-header-nav__source">
-            {% include "partials/source.html" %}
-          </div>
-        </div>
-      {% endif %}
-      <div class="md-flex__cell md-flex__cell--shrink" id="previous_published_versions">
-        <div class="dropdown">
-          <button class="btn btn-basic btn-sm dropdown-toggle" type="button" data-toggle="dropdown">
-            {{ config.extra.version }}
-          <span class="caret"></span></button>
-          <ul class="dropdown-menu">
-            {% for version in config.extra.previous_published_versions %}
-            <li><a href="#">{{version}}</a></li>
-            {% endfor %}
-          </ul>
-        </div>
-      </div>
-
-    </div>
-  </nav>
-</header>
--- a/doc/css/extra.css
+++ b/doc/css/extra.css
@ -9,11 +9,13 @@ body {
 } 

 /* Increase logo width because mkdocs material enforces 48 x 48 
-.md-logo img {
    width: 48px;
+*/
+.md-logo img {
+    width: 48px  ! Important;
    height: auto;
 }
-*/
+


 /* Add vertical rhythm
--- a/doc/theory/mbt.md
+++ b/doc/theory/mbt.md
@ -494,7 +494,7 @@ in comparison to [[ecut]], [[ecutwfn]] and [[ecuteps]].
 Another point worth noting is the presence in the expression of the Coulomb
 singularity for $| \qq + \GG | \rightarrow 0$ . 
 From a mathematical point of view, the integral is well-defined since the singularity is integrable in three-
-dimensional space once the thermodynamical limit, $N_\qq \rightarrow \infty$, is reached.
+dimensional space once the thermodynamic limit, $N_\qq \rightarrow \infty$, is reached.

 On the other hand, only a finite number of $\qq$-points can be used for
 practical applications, and a careful numerical treatment is needed to avoid
--- a/mkdocs.yml
+++ b/mkdocs.yml
@ -300,8 +300,6 @@ theme:
    name: material
    custom_dir: abinit_theme
    logo: images/logo-abinit-2015.png
-    #icon: 
-    #  logo: images/logo-abinit-2015.png
    favicon: images/favicon.ico
    palette:
        primary: deep orange
@ -317,7 +315,7 @@ plugins:
    - search:
          separator: '[\s\-\.]+'
          min_search_length: 2
-          #prebuild_index: true
+          #prebuild_index: true  # Should test whether this makes search faster.

 extra_css:
    - css/extra.css