Add reduce sum onnx ops to burn imports (#1723)

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Anton Blomström 2024-05-06 17:49:17 +02:00 committed by GitHub
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11 changed files with 256 additions and 2 deletions

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@ -143,7 +143,7 @@ represent the corresponding Burn Op.
| [ReduceMean][136] | ✅ | ✅ |
| [ReduceMin][137] | ❌ | ✅ |
| [ReduceProd][138] | ❌ | ✅ |
| [ReduceSum][139] | | ✅ |
| [ReduceSum][139] | | ✅ |
| [ReduceSumSquare][140] | ❌ | ❌ |
| [Relu][141] | ✅ | ✅ |
| [Reshape][142] | ✅ | ✅ |

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@ -42,6 +42,8 @@ fn main() {
.input("tests/prelu/prelu.onnx")
.input("tests/reduce_max/reduce_max.onnx")
.input("tests/reduce_mean/reduce_mean.onnx")
.input("tests/reduce_sum/reduce_sum_opset13.onnx")
.input("tests/reduce_sum/reduce_sum_opset11.onnx")
.input("tests/reshape/reshape.onnx")
.input("tests/shape/shape.onnx")
.input("tests/sigmoid/sigmoid.onnx")

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@ -51,6 +51,8 @@ include_models!(
recip,
reduce_max,
reduce_mean,
reduce_sum_opset13,
reduce_sum_opset11,
relu,
reshape,
shape,
@ -545,6 +547,38 @@ mod tests {
assert_eq!(output_value.to_data(), expected);
}
#[test]
fn reduce_sum_opset11() {
let device = Default::default();
let model: reduce_sum_opset11::Model<Backend> = reduce_sum_opset11::Model::new(&device);
// Run the model
let input = Tensor::<Backend, 4>::from_floats([[[[1.0, 4.0, 9.0, 25.0]]]], &device);
let (output_scalar, output_tensor, output_value) = model.forward(input.clone());
let expected_scalar = Data::from([39.]);
let expected = Data::from([[[[39.]]]]);
assert_eq!(output_scalar.to_data(), expected_scalar);
assert_eq!(output_tensor.to_data(), input.to_data());
assert_eq!(output_value.to_data(), expected);
}
#[test]
fn reduce_sum_opset13() {
let device = Default::default();
let model: reduce_sum_opset13::Model<Backend> = reduce_sum_opset13::Model::new(&device);
// Run the model
let input = Tensor::<Backend, 4>::from_floats([[[[1.0, 4.0, 9.0, 25.0]]]], &device);
let (output_scalar, output_tensor, output_value) = model.forward(input.clone());
let expected_scalar = Data::from([39.]);
let expected = Data::from([[[[39.]]]]);
assert_eq!(output_scalar.to_data(), expected_scalar);
assert_eq!(output_tensor.to_data(), input.to_data());
assert_eq!(output_value.to_data(), expected);
}
#[test]
fn reshape() {
// Initialize the model without weights (because the exported file does not contain them)

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@ -0,0 +1,46 @@
#!/usr/bin/env python3
# used to generate model: onnx-tests/tests/reduce_sum/reduce_sum.onnx
import torch
import torch.nn as nn
class Model(nn.Module):
def __init__(self):
super(Model, self).__init__()
def forward(self, x):
return (
# ReduceSum, keepdims=0, axes=None
torch.sum(x),
# ReduceSum, keepdims=1, axes=[1]
torch.sum(x, dim=1, keepdim=True),
# ReduceSum, keepdims=1, axes=[-1]
torch.sum(x, dim=-1, keepdim=True),
)
def main():
# Set random seed for reproducibility
torch.manual_seed(0)
# Export to onnx
model = Model()
model.eval()
device = torch.device("cpu")
test_input = torch.tensor([[[[1.0, 4.0, 9.0, 25.0]]]], device=device)
torch.onnx.export(model, test_input, "reduce_sum_opset11.onnx", verbose=False, opset_version=11)
torch.onnx.export(model, test_input, "reduce_sum_opset13.onnx", verbose=False, opset_version=13)
print("Finished exporting model")
# Output some test data for use in the test
print(f"Test input data: {test_input}")
output = model.forward(*test_input)
print(f"Test output data: {output}")
if __name__ == "__main__":
main()

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@ -34,6 +34,7 @@ pub enum UnaryNodeKind {
Not,
ReduceMax,
ReduceMean,
ReduceSum,
Reciprocal,
Relu,
Shape,
@ -62,6 +63,7 @@ impl UnaryNodeKind {
Self::Not => "not",
Self::ReduceMax => "reduce_max",
Self::ReduceMean => "reduce_mean",
Self::ReduceSum => "reduce_sum",
Self::Reciprocal => "reciprocal",
Self::Relu => "relu",
Self::Shape => "shape",
@ -355,6 +357,36 @@ impl UnaryNode {
}
}
pub(crate) fn reduce_sum(input: Type, output: Type, dim: Option<usize>) -> Self {
if let Type::Tensor(ref tensor) = output {
if let Some(dim) = dim {
if tensor.kind == TensorKind::Bool {
// Sum is only implemented on numeric tensors
panic!("ReduceSum is not supported for boolean");
}
// ReduceSum, keepdims=1, axes=[dim]
let dim = dim.to_tokens();
Self::new(
input,
output,
UnaryNodeKind::ReduceSum,
Rc::new(move |input| quote! { #input.sum_dim(#dim) }),
)
} else {
// ReduceSum, keepdims=0, axes=None
Self::new(
input,
output,
UnaryNodeKind::ReduceSum,
Rc::new(move |input| quote! { #input.sum() }),
)
}
} else {
panic!("ReduceSum only supports tensor output");
}
}
pub(crate) fn shape(input: Type, output: Type, start_dim: usize, end_dim: usize) -> Self {
// Shape as defined by the ONNX op should return a tensor because other ops
// (e.g., Gather) will be used on a tensor
@ -634,6 +666,43 @@ mod tests {
);
}
#[test]
fn test_unary_codegen_reduce_sum() {
one_node_graph(
UnaryNode::reduce_sum(
Type::Tensor(TensorType::new_float("tensor1", 4)),
Type::Tensor(TensorType::new_float("tensor2", 4)),
Some(1),
),
quote! {
pub fn forward(&self, tensor1: Tensor<B, 4>) -> Tensor<B, 4> {
let tensor2 = tensor1.sum_dim(1);
tensor2
}
},
vec!["tensor1".to_string()],
vec!["tensor2".to_string()],
);
one_node_graph(
UnaryNode::reduce_sum(
Type::Tensor(TensorType::new_float("tensor1", 4)),
Type::Tensor(TensorType::new_float("tensor2", 1)),
None,
),
quote! {
pub fn forward(&self, tensor1: Tensor<B, 4>) -> Tensor<B, 1> {
let tensor2 = tensor1.sum();
tensor2
}
},
vec!["tensor1".to_string()],
vec!["tensor2".to_string()],
);
}
#[test]
fn test_unary_codegen_reciprocal() {
one_node_graph(

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@ -45,6 +45,7 @@ pub fn dim_inference(node: &mut Node, graph_io: &mut OnnxGraphIO) {
NodeType::Reciprocal => same_as_input(node),
NodeType::ReduceMax => reduce_max_update_outputs(node),
NodeType::ReduceMean => reduce_mean_update_outputs(node),
NodeType::ReduceSum => reduce_sum_update_outputs(node),
NodeType::Relu => same_as_input(node),
NodeType::Reshape => reshape_update_outputs(node),
NodeType::Shape => shape_update_outputs(node),
@ -461,6 +462,44 @@ fn reduce_max_update_outputs(node: &mut Node) {
}
}
/// Infers the shape of a ReduceSum node and replaces the shape of the output tensor.
fn reduce_sum_update_outputs(node: &mut Node) {
let node_input = &mut node.inputs[0];
let tensor = match node_input.clone().ty {
ArgType::Tensor(tensor) => tensor,
_ => panic!("Only tensor input is valid"),
};
let dim_only = match node.attrs.get("axes") {
Some(value) => match &value {
AttributeValue::Int64(_) => true,
AttributeValue::Int64s(ints) => ints.len() == 1,
_ => false,
},
None => false,
};
let dim_only = match node.inputs.get(1).and_then(|arg| arg.value.as_ref()) {
Some(value) => match &value {
Data::Int64(_) => true,
Data::Int64s(ints) => ints.len() == 1,
_ => false,
},
None => dim_only,
};
if dim_only {
node.outputs[0].ty = ArgType::Tensor(tensor);
} else {
// NOTE: ReduceSum w/o keepdims reduces to a scalar value, but Burn doesn't have
// 0-dim tensor so we can't track or perform other ops on that value if we call
// `.into_scalar()` on the result of `tensor.sum()`
// node.outputs[0].ty = ArgType::Scalar(tensor.elem_type);
// Instead, we return a tensor of rank 1 (the result of `tensor.sum()`)
node.outputs[0].ty = ArgType::Tensor(TensorType { dim: 1, ..tensor });
}
}
fn where_update_outputs(node: &mut Node) {
match (
node.inputs[0].ty.clone(),

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@ -17,7 +17,7 @@ use super::ir::{ArgType, Argument, Node, NodeType};
use protobuf::Message;
const LIFT_CONSTANTS_FOR_NODE_TYPES: [NodeType; 7] = [
const LIFT_CONSTANTS_FOR_NODE_TYPES: [NodeType; 8] = [
NodeType::BatchNormalization,
NodeType::Clip,
NodeType::Conv1d,
@ -25,6 +25,7 @@ const LIFT_CONSTANTS_FOR_NODE_TYPES: [NodeType; 7] = [
NodeType::Dropout,
NodeType::Reshape,
NodeType::Unsqueeze,
NodeType::ReduceSum,
];
#[derive(Debug)]

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@ -798,6 +798,60 @@ pub fn reduce_mean_config(node: &Node) -> Option<usize> {
}
}
pub fn reduce_sum_config(node: &Node) -> Option<usize> {
let mut axes = Vec::new();
let mut keepdims = 1;
let tensor = match node.inputs.first().unwrap().clone().ty {
ArgType::Tensor(tensor) => tensor,
_ => panic!("Only tensor input is valid"),
};
// Extract the attributes
for (key, value) in node.attrs.iter() {
match key.as_str() {
"keepdims" => keepdims = value.clone().into_i64(),
"axes" => axes = value.clone().into_i64s(),
// TODO: handle noop_with_empty_axes
_ => {}
}
}
// TODO: Handle case where axes are passed in. Will require its own ReduceSumNode instead of a UnaryNode.
if let Some(value) = node
.inputs
.get(1)
.and_then(|argument| argument.value.as_ref())
{
axes = value.clone().into_i64s();
}
if axes.len() > 1 {
panic!("ReduceMean: reducing on multiple dimensions is not supported")
}
if axes.is_empty() && keepdims == 1 {
panic!("ReduceMean: axes must be provided with keepdims")
}
if !axes.is_empty() && keepdims == 0 {
// Not supported in Burn
panic!("ReduceMean: the reduce operation must preserve the reduced dimension")
}
if axes.is_empty() {
None
} else {
let mut dim = axes[0];
if dim < 0 {
// Accepted range is [-r, r-1] where r = rank(data) but Burn only supports positive dim
dim += tensor.dim as i64;
}
Some(dim as usize)
}
}
pub fn shape_config(curr: &Node) -> (usize, usize) {
if curr.inputs.len() != 1 {
panic!(

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@ -265,6 +265,7 @@ impl OnnxGraph {
NodeType::Constant => graph.register(Self::constant_conversion::<PS>(node)),
NodeType::ReduceMax => graph.register(Self::reduce_max_conversion(node)),
NodeType::ReduceMean => graph.register(Self::reduce_mean_conversion(node)),
NodeType::ReduceSum => graph.register(Self::reduce_sum_conversion(node)),
NodeType::Reshape => graph.register(Self::reshape_conversion(node)),
NodeType::Reciprocal => graph.register(Self::reciprocal_conversion(node)),
NodeType::Shape => graph.register(Self::shape_conversion(node)),
@ -501,6 +502,14 @@ impl OnnxGraph {
UnaryNode::reduce_mean(input, output, dim)
}
fn reduce_sum_conversion(node: Node) -> UnaryNode {
let input = node.inputs.first().unwrap().to_type();
let output = node.outputs.first().unwrap().to_type();
let dim = reduce_sum_config(&node);
UnaryNode::reduce_sum(input, output, dim)
}
fn shape_conversion(node: Node) -> UnaryNode {
let input = node.inputs.first().unwrap().to_type();
let output = node.outputs.first().unwrap().to_type();